Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Gm23032-201ENSMUST00000157995 107 ntBASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Gm25413-201ENSMUST00000158544 312 ntBASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Gm7241-201ENSMUST00000159853 357 ntBASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Gm2855-201ENSMUST00000166765 456 ntBASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Gm8296-201ENSMUST00000185597 524 ntBASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Gm19774-201ENSMUST00000190667 114 ntBASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Gm38329-201ENSMUST00000193473 427 ntBASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Gm7142-201ENSMUST00000194232 586 ntBASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Gm43043-201ENSMUST00000196579 412 ntBASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC4.07□□□□□ -1.76
Vps28Q9D1C8 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Gm18026-201ENSMUST00000222789 727 ntBASIC4.07□□□□□ -1.76
Vps28Q9D1C8 AC154224.1-201ENSMUST00000224367 403 ntBASIC4.07□□□□□ -1.76
Vps28Q9D1C8 AC154594.1-201ENSMUST00000225171 1273 ntBASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Vps28Q9D1C8 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.07□□□□□ -1.76
Vps28Q9D1C8 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Vps28Q9D1C8 BC051076-202ENSMUST00000199477 2868 ntBASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Gm14299-201ENSMUST00000117586 397 ntBASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Gm13640-201ENSMUST00000118445 264 ntBASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Gm14103-201ENSMUST00000119075 366 ntBASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC4.06□□□□□ -1.76
Vps28Q9D1C8 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Gm22143-201ENSMUST00000157401 203 ntBASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Gm23824-201ENSMUST00000158741 276 ntBASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Gm37416-201ENSMUST00000193596 318 ntBASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Mir7682-201ENSMUST00000198467 58 ntBASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Gm44076-201ENSMUST00000203072 520 ntBASIC4.06□□□□□ -1.76
Vps28Q9D1C8 AC153852.1-201ENSMUST00000217881 567 ntBASIC4.06□□□□□ -1.76
Vps28Q9D1C8 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.06□□□□□ -1.76
Vps28Q9D1C8 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.06□□□□□ -1.76
Vps28Q9D1C8 AC154506.3-201ENSMUST00000225417 213 ntBASIC4.06□□□□□ -1.76
Vps28Q9D1C8 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Gm7099-201ENSMUST00000080066 554 ntBASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Mir370-201ENSMUST00000083499 79 ntBASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.06□□□□□ -1.76
Vps28Q9D1C8 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Gm25213-201ENSMUST00000102388 113 ntBASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Gm24831-201ENSMUST00000116778 126 ntBASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Gm12016-201ENSMUST00000119079 681 ntBASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Gm14037-201ENSMUST00000120576 313 ntBASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Gm6373-201ENSMUST00000121026 360 ntBASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Gm11931-201ENSMUST00000121630 447 ntBASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Spanxn4-201ENSMUST00000172433 424 ntBASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Zfp950-206ENSMUST00000178819 171 ntBASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Gm28412-201ENSMUST00000187243 177 ntBASIC4.05□□□□□ -1.76
Vps28Q9D1C8 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Gm38076-201ENSMUST00000193889 450 ntBASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Gm37817-201ENSMUST00000195276 434 ntBASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Mir129b-201ENSMUST00000197461 65 ntBASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Gm43441-201ENSMUST00000201458 205 ntBASIC4.05□□□□□ -1.76
Vps28Q9D1C8 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Vps28Q9D1C8 AC102815.1-201ENSMUST00000226662 1061 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms