Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm12112-201ENSMUST00000117772 231 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm15094-201ENSMUST00000118394 1131 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm11693-201ENSMUST00000119625 565 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm12825-201ENSMUST00000120249 563 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm15166-201ENSMUST00000120790 385 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm24532-201ENSMUST00000157951 286 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm24636-201ENSMUST00000158673 288 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm22584-201ENSMUST00000177935 92 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Mir6903-201ENSMUST00000183597 88 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Mir1957b-201ENSMUST00000184608 123 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm27457-201ENSMUST00000184771 156 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm29576-201ENSMUST00000188020 678 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm28354-201ENSMUST00000190904 678 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm18296-201ENSMUST00000192475 783 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm29740-201ENSMUST00000193182 655 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm37550-201ENSMUST00000193230 463 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm38395-201ENSMUST00000199904 830 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm17956-201ENSMUST00000199931 838 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm44923-201ENSMUST00000206673 85 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm18306-201ENSMUST00000207338 569 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm45236-201ENSMUST00000208632 229 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm45392-201ENSMUST00000210441 214 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 AL669916.3-201ENSMUST00000213855 94 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 AL669916.6-201ENSMUST00000214610 94 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 AL669916.4-201ENSMUST00000215976 94 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 AL669916.1-201ENSMUST00000217640 94 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 AC129208.2-201ENSMUST00000228506 320 ntBASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ddx56Q9D0R4 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Gm14303-201ENSMUST00000121320 171 ntBASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Gm4487-201ENSMUST00000150617 442 ntBASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Gm22059-201ENSMUST00000157544 104 ntBASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Gm24438-201ENSMUST00000157893 115 ntBASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Gm25670-201ENSMUST00000178423 107 ntBASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Gm22243-201ENSMUST00000178754 120 ntBASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Gm26239-201ENSMUST00000178842 107 ntBASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Gm24267-201ENSMUST00000179841 107 ntBASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Gm28830-201ENSMUST00000188192 213 ntBASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Gm44521-201ENSMUST00000206469 217 ntBASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 AC123062.1-201ENSMUST00000221287 481 ntBASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 AC164297.5-201ENSMUST00000224365 198 ntBASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 AC124549.1-201ENSMUST00000225912 333 ntBASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Gm24292-201ENSMUST00000082888 107 ntBASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Neat1-201ENSMUST00000173672 20771 ntBASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Ddx56Q9D0R4 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms