Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Ddx28Q9CWT6 Gm42721-201ENSMUST00000197165 1523 ntBASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Gm24125-201ENSMUST00000104105 137 ntBASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Gm14731-201ENSMUST00000119216 376 ntBASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Gm12607-201ENSMUST00000120724 493 ntBASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Gm15878-201ENSMUST00000127561 306 ntBASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Gm22637-201ENSMUST00000158144 283 ntBASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Gm25606-201ENSMUST00000158363 95 ntBASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Gm4540-201ENSMUST00000170669 429 ntBASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Gm9613-201ENSMUST00000171662 196 ntBASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Gm23215-201ENSMUST00000178153 121 ntBASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Gm22307-201ENSMUST00000180019 107 ntBASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Gm5974-201ENSMUST00000181607 986 ntBASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Gm19224-201ENSMUST00000190477 793 ntBASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Gm37576-201ENSMUST00000194228 372 ntBASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Gm35212-201ENSMUST00000196672 606 ntBASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Gm8035-201ENSMUST00000204625 687 ntBASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 AC125531.1-201ENSMUST00000219849 221 ntBASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Gm23928-201ENSMUST00000082469 145 ntBASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Gm24921-201ENSMUST00000083024 107 ntBASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Gm43178-201ENSMUST00000197257 1386 ntBASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Gm14404-201ENSMUST00000119117 1660 ntBASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Ddx28Q9CWT6 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Gm23481-201ENSMUST00000104173 131 ntBASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Gm16431-201ENSMUST00000117454 431 ntBASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Gm13501-201ENSMUST00000118477 979 ntBASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Gm13064-201ENSMUST00000119125 557 ntBASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Gm11407-201ENSMUST00000120362 1058 ntBASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Gm12486-201ENSMUST00000120887 541 ntBASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Gm6591-201ENSMUST00000121063 434 ntBASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Gm15075-201ENSMUST00000122187 477 ntBASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Gm3102-201ENSMUST00000164236 489 ntBASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Gm17064-201ENSMUST00000167690 452 ntBASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Gm20773-201ENSMUST00000178940 681 ntBASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Gm20162-201ENSMUST00000193629 871 ntBASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Gm17951-201ENSMUST00000198536 496 ntBASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Gm43810-201ENSMUST00000201018 232 ntBASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Gm45063-201ENSMUST00000203726 472 ntBASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Gm44212-201ENSMUST00000205016 897 ntBASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Gm3189-201ENSMUST00000205595 832 ntBASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 AC154252.1-201ENSMUST00000226041 473 ntBASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 AC154484.1-201ENSMUST00000227311 771 ntBASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Mir26a-2-201ENSMUST00000083496 84 ntBASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Gm7171-201ENSMUST00000177413 1349 ntBASIC3.7□□□□□ -1.82
Ddx28Q9CWT6 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Gm23178-201ENSMUST00000116782 95 ntBASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Gm12173-201ENSMUST00000117622 273 ntBASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Gm11625-201ENSMUST00000119535 296 ntBASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Gm12190-201ENSMUST00000120001 187 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 108.9 ms