Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.05□□□□□ -1.76
Smc1aQ9CU62 AC159293.2-201ENSMUST00000222289 424 ntBASIC4.05□□□□□ -1.76
Smc1aQ9CU62 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC4.05□□□□□ -1.76
Smc1aQ9CU62 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.05□□□□□ -1.76
Smc1aQ9CU62 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.05□□□□□ -1.76
Smc1aQ9CU62 AC102575.1-201ENSMUST00000225348 547 ntBASIC4.05□□□□□ -1.76
Smc1aQ9CU62 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Smc1aQ9CU62 Mir30e-201ENSMUST00000083475 92 ntBASIC4.05□□□□□ -1.76
Smc1aQ9CU62 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC4.05□□□□□ -1.76
Smc1aQ9CU62 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC4.05□□□□□ -1.76
Smc1aQ9CU62 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Smc1aQ9CU62 Gm44438-201ENSMUST00000204388 3236 ntBASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Smc1aQ9CU62 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Gm12106-201ENSMUST00000116006 1200 ntBASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Gm12507-201ENSMUST00000119155 415 ntBASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Gm12276-201ENSMUST00000121709 301 ntBASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Mup-ps15-201ENSMUST00000121741 539 ntBASIC4.04□□□□□ -1.76
Smc1aQ9CU62 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Gm8161-201ENSMUST00000168739 481 ntBASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC4.04□□□□□ -1.76
Smc1aQ9CU62 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Gm27535-201ENSMUST00000183814 157 ntBASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Gm44348-201ENSMUST00000200165 122 ntBASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Smc1aQ9CU62 AC132384.9-201ENSMUST00000218085 277 ntBASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Gm3565-201ENSMUST00000222670 609 ntBASIC4.04□□□□□ -1.76
Smc1aQ9CU62 AC167669.1-201ENSMUST00000224932 384 ntBASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Gm10780-201ENSMUST00000099459 285 ntBASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Smc1aQ9CU62 Gm45540-201ENSMUST00000209271 3606 ntBASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.03□□□□□ -1.76
Smc1aQ9CU62 n-R5s219-201ENSMUST00000104328 132 ntBASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Gm13650-201ENSMUST00000117729 433 ntBASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Gm13076-201ENSMUST00000118041 204 ntBASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Gm22478-201ENSMUST00000122570 154 ntBASIC4.03□□□□□ -1.76
Smc1aQ9CU62 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Gm23667-201ENSMUST00000157466 120 ntBASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Gm22380-201ENSMUST00000157479 95 ntBASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Gm24014-201ENSMUST00000157728 157 ntBASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Gm23666-201ENSMUST00000158053 116 ntBASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Gm4207-201ENSMUST00000173144 960 ntBASIC4.03□□□□□ -1.76
Smc1aQ9CU62 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Gm5829-201ENSMUST00000191383 351 ntBASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Gm18327-201ENSMUST00000202426 830 ntBASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Gm43155-201ENSMUST00000202661 494 ntBASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Gm5322-201ENSMUST00000206142 699 ntBASIC4.03□□□□□ -1.76
Smc1aQ9CU62 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Gm46234-201ENSMUST00000218702 259 ntBASIC4.03□□□□□ -1.76
Smc1aQ9CU62 AC153522.1-201ENSMUST00000220047 1090 ntBASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Smc1aQ9CU62 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
Smc1aQ9CU62 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Smc1aQ9CU62 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Smc1aQ9CU62 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Smc1aQ9CU62 Gm22497-201ENSMUST00000104499 131 ntBASIC4.02□□□□□ -1.77
Smc1aQ9CU62 Gm11704-201ENSMUST00000120031 214 ntBASIC4.02□□□□□ -1.77
Smc1aQ9CU62 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC4.02□□□□□ -1.77
Smc1aQ9CU62 Gm23326-201ENSMUST00000157419 105 ntBASIC4.02□□□□□ -1.77
Smc1aQ9CU62 Gm23123-201ENSMUST00000157648 144 ntBASIC4.02□□□□□ -1.77
Smc1aQ9CU62 Gm24727-201ENSMUST00000158231 144 ntBASIC4.02□□□□□ -1.77
Smc1aQ9CU62 Gm24773-201ENSMUST00000158513 99 ntBASIC4.02□□□□□ -1.77
Smc1aQ9CU62 Gm24550-201ENSMUST00000158648 279 ntBASIC4.02□□□□□ -1.77
Smc1aQ9CU62 Gm6900-201ENSMUST00000178971 342 ntBASIC4.02□□□□□ -1.77
Smc1aQ9CU62 Gm23860-201ENSMUST00000179446 132 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms