Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc43Q9CR29 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ccdc43Q9CR29 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ccdc43Q9CR29 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ccdc43Q9CR29 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.03□□□□□ -1.76
Ccdc43Q9CR29 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Ccdc43Q9CR29 AC159193.2-201ENSMUST00000220865 4251 ntBASIC4.03□□□□□ -1.76
Ccdc43Q9CR29 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc43Q9CR29 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Gm11693-201ENSMUST00000119625 565 ntBASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Gm16053-201ENSMUST00000120511 188 ntBASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Gm24930-201ENSMUST00000158315 83 ntBASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Gm26362-201ENSMUST00000158865 315 ntBASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Gm18397-201ENSMUST00000176704 587 ntBASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Gm28255-201ENSMUST00000187101 694 ntBASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Gm37708-201ENSMUST00000192337 895 ntBASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Gm18900-201ENSMUST00000193218 584 ntBASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Gm9632-201ENSMUST00000195934 643 ntBASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Gm43704-201ENSMUST00000196164 496 ntBASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Gm18410-201ENSMUST00000207199 577 ntBASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Gm26437-201ENSMUST00000082595 105 ntBASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Gm25800-201ENSMUST00000082636 134 ntBASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Gm45263-201ENSMUST00000210377 1375 ntBASIC4.02□□□□□ -1.77
Ccdc43Q9CR29 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm44164-201ENSMUST00000203605 2561 ntBASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm26418-201ENSMUST00000104275 137 ntBASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 n-R5s52-201ENSMUST00000104614 113 ntBASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm15125-201ENSMUST00000116185 800 ntBASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm14599-201ENSMUST00000120469 474 ntBASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm14600-201ENSMUST00000121032 630 ntBASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm22120-201ENSMUST00000175590 70 ntBASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm29299-201ENSMUST00000185609 923 ntBASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm29408-201ENSMUST00000187536 216 ntBASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm29573-201ENSMUST00000190291 919 ntBASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms