Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Mir673-201ENSMUST00000102361 91 ntBASIC3.27□□□□□ -1.89
Rpa3Q9CQ71 Gm11387-201ENSMUST00000120266 772 ntBASIC3.27□□□□□ -1.89
Rpa3Q9CQ71 Gm22345-201ENSMUST00000122644 107 ntBASIC3.27□□□□□ -1.89
Rpa3Q9CQ71 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Rpa3Q9CQ71 Gm23168-201ENSMUST00000157156 143 ntBASIC3.27□□□□□ -1.89
Rpa3Q9CQ71 Gm22792-201ENSMUST00000157225 133 ntBASIC3.27□□□□□ -1.89
Rpa3Q9CQ71 Gm26005-201ENSMUST00000158802 134 ntBASIC3.27□□□□□ -1.89
Rpa3Q9CQ71 Gm24666-201ENSMUST00000158937 167 ntBASIC3.27□□□□□ -1.89
Rpa3Q9CQ71 Gm26061-201ENSMUST00000175584 108 ntBASIC3.27□□□□□ -1.89
Rpa3Q9CQ71 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC3.27□□□□□ -1.89
Rpa3Q9CQ71 Gm28594-201ENSMUST00000187022 661 ntBASIC3.27□□□□□ -1.89
Rpa3Q9CQ71 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Rpa3Q9CQ71 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.27□□□□□ -1.89
Rpa3Q9CQ71 Gm43932-201ENSMUST00000204499 52 ntBASIC3.27□□□□□ -1.89
Rpa3Q9CQ71 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.27□□□□□ -1.89
Rpa3Q9CQ71 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC3.27□□□□□ -1.89
Rpa3Q9CQ71 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.27□□□□□ -1.89
Rpa3Q9CQ71 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Rpa3Q9CQ71 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Rpa3Q9CQ71 Gm26129-201ENSMUST00000082719 107 ntBASIC3.27□□□□□ -1.89
Rpa3Q9CQ71 Gm22739-201ENSMUST00000083437 160 ntBASIC3.27□□□□□ -1.89
Rpa3Q9CQ71 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.27□□□□□ -1.89
Rpa3Q9CQ71 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Rpa3Q9CQ71 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.26□□□□□ -1.89
Rpa3Q9CQ71 BC051076-202ENSMUST00000199477 2868 ntBASIC3.26□□□□□ -1.89
Rpa3Q9CQ71 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.26□□□□□ -1.89
Rpa3Q9CQ71 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
Rpa3Q9CQ71 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.26□□□□□ -1.89
Rpa3Q9CQ71 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.26□□□□□ -1.89
Rpa3Q9CQ71 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.26□□□□□ -1.89
Rpa3Q9CQ71 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.26□□□□□ -1.89
Rpa3Q9CQ71 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Rpa3Q9CQ71 Gm24213-201ENSMUST00000158255 258 ntBASIC3.26□□□□□ -1.89
Rpa3Q9CQ71 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.26□□□□□ -1.89
Rpa3Q9CQ71 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
Rpa3Q9CQ71 Gm24811-201ENSMUST00000175313 100 ntBASIC3.26□□□□□ -1.89
Rpa3Q9CQ71 Mir3106-201ENSMUST00000175401 82 ntBASIC3.26□□□□□ -1.89
Rpa3Q9CQ71 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.26□□□□□ -1.89
Rpa3Q9CQ71 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.26□□□□□ -1.89
Rpa3Q9CQ71 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.26□□□□□ -1.89
Rpa3Q9CQ71 Gm43124-201ENSMUST00000201878 278 ntBASIC3.26□□□□□ -1.89
Rpa3Q9CQ71 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Rpa3Q9CQ71 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Rpa3Q9CQ71 AC154467.1-201ENSMUST00000227527 449 ntBASIC3.26□□□□□ -1.89
Rpa3Q9CQ71 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Rpa3Q9CQ71 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Rpa3Q9CQ71 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Rpa3Q9CQ71 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Gm14163-201ENSMUST00000117342 217 ntBASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Gm11576-201ENSMUST00000117433 417 ntBASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Gm15854-201ENSMUST00000118879 808 ntBASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Gm11625-201ENSMUST00000119535 296 ntBASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Gm15367-201ENSMUST00000122398 1016 ntBASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Gm22730-201ENSMUST00000158085 171 ntBASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Gm19126-201ENSMUST00000207896 509 ntBASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Gm8681-201ENSMUST00000219115 618 ntBASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Rpa3Q9CQ71 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Rpa3Q9CQ71 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Rpa3Q9CQ71 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Rpa3Q9CQ71 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
Rpa3Q9CQ71 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Rpa3Q9CQ71 Gm22115-201ENSMUST00000103976 133 ntBASIC3.24□□□□□ -1.89
Rpa3Q9CQ71 Gm23923-201ENSMUST00000104108 133 ntBASIC3.24□□□□□ -1.89
Rpa3Q9CQ71 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.24□□□□□ -1.89
Rpa3Q9CQ71 Gm13471-201ENSMUST00000122057 433 ntBASIC3.24□□□□□ -1.89
Rpa3Q9CQ71 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.24□□□□□ -1.89
Rpa3Q9CQ71 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.24□□□□□ -1.89
Rpa3Q9CQ71 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC3.24□□□□□ -1.89
Rpa3Q9CQ71 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.24□□□□□ -1.89
Rpa3Q9CQ71 Gm25432-201ENSMUST00000158284 66 ntBASIC3.24□□□□□ -1.89
Rpa3Q9CQ71 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.24□□□□□ -1.89
Rpa3Q9CQ71 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Rpa3Q9CQ71 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.24□□□□□ -1.89
Rpa3Q9CQ71 Gm26297-201ENSMUST00000179464 132 ntBASIC3.24□□□□□ -1.89
Rpa3Q9CQ71 Gm27760-201ENSMUST00000185048 114 ntBASIC3.24□□□□□ -1.89
Rpa3Q9CQ71 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Rpa3Q9CQ71 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC3.24□□□□□ -1.89
Rpa3Q9CQ71 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.24□□□□□ -1.89
Rpa3Q9CQ71 Gm7948-201ENSMUST00000212607 844 ntBASIC3.24□□□□□ -1.89
Rpa3Q9CQ71 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms