Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Trim11Q99PQ2 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trim11Q99PQ2 Gm38032-201ENSMUST00000195052 1589 ntBASIC5.72□□□□□ -1.49
Trim11Q99PQ2 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Trim11Q99PQ2 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Trim11Q99PQ2 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.49
Trim11Q99PQ2 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Trim11Q99PQ2 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.71□□□□□ -1.49
Trim11Q99PQ2 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Gm12722-201ENSMUST00000118507 493 ntBASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Gm14541-201ENSMUST00000118985 157 ntBASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Gm12686-201ENSMUST00000120546 397 ntBASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Gm14601-201ENSMUST00000120892 236 ntBASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Gm7846-201ENSMUST00000145844 274 ntBASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Gm26102-201ENSMUST00000157251 284 ntBASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Gm24395-201ENSMUST00000158139 125 ntBASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Gm23855-201ENSMUST00000158377 135 ntBASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC5.71□□□□□ -1.5
Trim11Q99PQ2 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Mir6400-201ENSMUST00000184870 92 ntBASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Gm18488-201ENSMUST00000215082 364 ntBASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
Trim11Q99PQ2 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Olfr151-202ENSMUST00000221099 929 ntBASIC5.71□□□□□ -1.5
Trim11Q99PQ2 AC154552.1-201ENSMUST00000222969 202 ntBASIC5.71□□□□□ -1.5
Trim11Q99PQ2 AL606513.1-201ENSMUST00000225369 579 ntBASIC5.71□□□□□ -1.5
Trim11Q99PQ2 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Gm25699-201ENSMUST00000082896 167 ntBASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Gm23459-201ENSMUST00000083259 131 ntBASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Gm23972-201ENSMUST00000083322 165 ntBASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Gm9386-201ENSMUST00000095195 381 ntBASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim11Q99PQ2 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Trim11Q99PQ2 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Trim11Q99PQ2 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm43443-201ENSMUST00000202337 2393 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm14355-201ENSMUST00000117352 264 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm15357-201ENSMUST00000119160 285 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm11481-201ENSMUST00000120069 255 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm11556-201ENSMUST00000120751 288 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm13345-201ENSMUST00000121928 228 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm14333-201ENSMUST00000130484 264 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm24914-201ENSMUST00000157285 313 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm24289-201ENSMUST00000157629 135 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm24504-201ENSMUST00000157679 100 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm23179-201ENSMUST00000158693 304 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm17109-201ENSMUST00000163985 358 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm8161-201ENSMUST00000168739 481 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm17086-201ENSMUST00000171346 484 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm20401-201ENSMUST00000173717 212 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Snora15-201ENSMUST00000177461 131 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm22448-201ENSMUST00000179254 107 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm26180-201ENSMUST00000179942 107 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm4557-201ENSMUST00000185826 907 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm4526-201ENSMUST00000186039 920 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm5058-201ENSMUST00000187331 463 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm8708-201ENSMUST00000188500 906 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm8929-201ENSMUST00000197781 1132 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Trav15n-3-201ENSMUST00000200498 168 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC5.7□□□□□ -1.5
Trim11Q99PQ2 CT025536.1-201ENSMUST00000226744 844 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 AC131029.2-202ENSMUST00000228430 496 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm25818-201ENSMUST00000083282 164 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Mir133b-201ENSMUST00000083546 119 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm25937-201ENSMUST00000083912 107 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim11Q99PQ2 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms