Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm38269-201ENSMUST00000194549 3298 ntBASIC2.57□□□□□ -2
Cspg4Q8VHY0 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Cspg4Q8VHY0 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Cspg4Q8VHY0 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC2.57□□□□□ -2
Cspg4Q8VHY0 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC2.57□□□□□ -2
Cspg4Q8VHY0 Gm18595-201ENSMUST00000175736 1068 ntBASIC2.57□□□□□ -2
Cspg4Q8VHY0 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Cspg4Q8VHY0 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Cspg4Q8VHY0 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Cspg4Q8VHY0 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Cspg4Q8VHY0 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.57□□□□□ -2
Cspg4Q8VHY0 Gm28639-201ENSMUST00000191519 481 ntBASIC2.57□□□□□ -2
Cspg4Q8VHY0 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.57□□□□□ -2
Cspg4Q8VHY0 Gm19104-201ENSMUST00000198392 679 ntBASIC2.57□□□□□ -2
Cspg4Q8VHY0 Gm43746-201ENSMUST00000200028 317 ntBASIC2.57□□□□□ -2
Cspg4Q8VHY0 Gm44212-201ENSMUST00000205016 897 ntBASIC2.57□□□□□ -2
Cspg4Q8VHY0 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Cspg4Q8VHY0 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Cspg4Q8VHY0 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC2.56□□□□□ -2
Cspg4Q8VHY0 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Cspg4Q8VHY0 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
Cspg4Q8VHY0 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Cspg4Q8VHY0 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Cspg4Q8VHY0 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Cspg4Q8VHY0 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.56□□□□□ -2
Cspg4Q8VHY0 Gm13439-201ENSMUST00000117541 409 ntBASIC2.56□□□□□ -2
Cspg4Q8VHY0 Gm13511-201ENSMUST00000121167 363 ntBASIC2.56□□□□□ -2
Cspg4Q8VHY0 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC2.56□□□□□ -2
Cspg4Q8VHY0 Gm25528-201ENSMUST00000180264 132 ntBASIC2.56□□□□□ -2
Cspg4Q8VHY0 CT030247.1-201ENSMUST00000216810 267 ntBASIC2.56□□□□□ -2
Cspg4Q8VHY0 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.56□□□□□ -2
Cspg4Q8VHY0 AC138401.2-201ENSMUST00000220461 365 ntBASIC2.56□□□□□ -2
Cspg4Q8VHY0 AC134596.2-201ENSMUST00000222158 171 ntBASIC2.56□□□□□ -2
Cspg4Q8VHY0 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.56□□□□□ -2
Cspg4Q8VHY0 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Cspg4Q8VHY0 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.56□□□□□ -2
Cspg4Q8VHY0 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Cspg4Q8VHY0 Gm24120-201ENSMUST00000103978 129 ntBASIC2.56□□□□□ -2
Cspg4Q8VHY0 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.56□□□□□ -2
Cspg4Q8VHY0 Gm7855-201ENSMUST00000137737 687 ntBASIC2.56□□□□□ -2
Cspg4Q8VHY0 Gm25116-201ENSMUST00000157191 122 ntBASIC2.56□□□□□ -2
Cspg4Q8VHY0 Gm45382-201ENSMUST00000210607 151 ntBASIC2.56□□□□□ -2
Cspg4Q8VHY0 AC132384.13-201ENSMUST00000219556 1159 ntBASIC2.56□□□□□ -2
Cspg4Q8VHY0 AC160958.1-201ENSMUST00000224833 368 ntBASIC2.56□□□□□ -2
Cspg4Q8VHY0 Snora33-201ENSMUST00000093556 129 ntBASIC2.56□□□□□ -2
Cspg4Q8VHY0 Gm8074-201ENSMUST00000095071 252 ntBASIC2.56□□□□□ -2
Cspg4Q8VHY0 Gm44675-201ENSMUST00000208188 2927 ntBASIC2.55□□□□□ -2
Cspg4Q8VHY0 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Cspg4Q8VHY0 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC2.55□□□□□ -2
Cspg4Q8VHY0 Gm25421-201ENSMUST00000104218 164 ntBASIC2.55□□□□□ -2
Cspg4Q8VHY0 Gm15536-201ENSMUST00000121411 114 ntBASIC2.55□□□□□ -2
Cspg4Q8VHY0 Gm13433-201ENSMUST00000121701 240 ntBASIC2.55□□□□□ -2
Cspg4Q8VHY0 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC2.55□□□□□ -2
Cspg4Q8VHY0 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC2.55□□□□□ -2
Cspg4Q8VHY0 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.55□□□□□ -2
Cspg4Q8VHY0 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Cspg4Q8VHY0 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC2.55□□□□□ -2
Cspg4Q8VHY0 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Cspg4Q8VHY0 Gm13588-201ENSMUST00000120026 135 ntBASIC2.54□□□□□ -2
Cspg4Q8VHY0 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC2.54□□□□□ -2
Cspg4Q8VHY0 Gm45259-201ENSMUST00000209217 1006 ntBASIC2.54□□□□□ -2
Cspg4Q8VHY0 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC2.54□□□□□ -2
Cspg4Q8VHY0 Gm5175-202ENSMUST00000219699 529 ntBASIC2.54□□□□□ -2
Cspg4Q8VHY0 Gm18388-201ENSMUST00000222339 557 ntBASIC2.54□□□□□ -2
Cspg4Q8VHY0 AC126253.2-201ENSMUST00000226518 205 ntBASIC2.54□□□□□ -2
Cspg4Q8VHY0 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Cspg4Q8VHY0 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC2.54□□□□□ -2
Cspg4Q8VHY0 Gm9174-201ENSMUST00000078149 255 ntBASIC2.54□□□□□ -2
Cspg4Q8VHY0 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cspg4Q8VHY0 AC131720.1-201ENSMUST00000218629 2132 ntBASIC2.54□□□□□ -2
Cspg4Q8VHY0 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cspg4Q8VHY0 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC2.54□□□□□ -2
Cspg4Q8VHY0 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC2.54□□□□□ -2
Cspg4Q8VHY0 Gm14142-201ENSMUST00000117833 296 ntBASIC2.54□□□□□ -2
Cspg4Q8VHY0 Gm12387-201ENSMUST00000118573 955 ntBASIC2.54□□□□□ -2
Cspg4Q8VHY0 Mir5127-201ENSMUST00000175295 71 ntBASIC2.54□□□□□ -2
Cspg4Q8VHY0 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC2.54□□□□□ -2
Cspg4Q8VHY0 Gm28466-201ENSMUST00000190678 659 ntBASIC2.54□□□□□ -2
Cspg4Q8VHY0 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.54□□□□□ -2
Cspg4Q8VHY0 Gm38008-201ENSMUST00000195333 518 ntBASIC2.54□□□□□ -2
Cspg4Q8VHY0 Gm10242-201ENSMUST00000090064 330 ntBASIC2.54□□□□□ -2
Cspg4Q8VHY0 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cspg4Q8VHY0 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cspg4Q8VHY0 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC2.54□□□□□ -2
Cspg4Q8VHY0 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Cspg4Q8VHY0 Gm8580-201ENSMUST00000160295 464 ntBASIC2.53□□□□□ -2
Cspg4Q8VHY0 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC2.53□□□□□ -2
Cspg4Q8VHY0 Gm19203-201ENSMUST00000174049 939 ntBASIC2.53□□□□□ -2
Cspg4Q8VHY0 Gm25360-201ENSMUST00000178786 191 ntBASIC2.53□□□□□ -2
Cspg4Q8VHY0 Gm21960-201ENSMUST00000181924 452 ntBASIC2.53□□□□□ -2
Cspg4Q8VHY0 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC2.53□□□□□ -2
Cspg4Q8VHY0 Gm44016-201ENSMUST00000203463 164 ntBASIC2.53□□□□□ -2
Cspg4Q8VHY0 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.53□□□□□ -2
Cspg4Q8VHY0 Gm7422-201ENSMUST00000220115 640 ntBASIC2.53□□□□□ -2
Cspg4Q8VHY0 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC2.53□□□□□ -2
Cspg4Q8VHY0 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Cspg4Q8VHY0 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.53□□□□□ -2
Cspg4Q8VHY0 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Cspg4Q8VHY0 Gm42927-201ENSMUST00000200624 3841 ntBASIC2.53□□□□□ -2
Cspg4Q8VHY0 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms