Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Gm44656-201ENSMUST00000208428 490 ntBASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Gm30674-201ENSMUST00000214523 392 ntBASIC3.59□□□□□ -1.83
Vps39Q8R5L3 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Gm9628-201ENSMUST00000222169 725 ntBASIC3.59□□□□□ -1.83
Vps39Q8R5L3 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Vps39Q8R5L3 AC154692.1-201ENSMUST00000228314 544 ntBASIC3.59□□□□□ -1.83
Vps39Q8R5L3 AC074315.1-201ENSMUST00000228801 214 ntBASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Vps39Q8R5L3 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Vps39Q8R5L3 Gm336-201ENSMUST00000186376 1480 ntBASIC3.59□□□□□ -1.84
Vps39Q8R5L3 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Vps39Q8R5L3 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Vps39Q8R5L3 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Gm11577-201ENSMUST00000118030 737 ntBASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Gm15231-201ENSMUST00000119174 447 ntBASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Gm12543-201ENSMUST00000120410 543 ntBASIC3.58□□□□□ -1.84
Vps39Q8R5L3 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Gm25883-201ENSMUST00000157781 271 ntBASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Gm23112-201ENSMUST00000158606 125 ntBASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Gm16101-201ENSMUST00000160695 430 ntBASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Gm17655-201ENSMUST00000167969 255 ntBASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Gm20574-201ENSMUST00000182867 917 ntBASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Gm27715-201ENSMUST00000184714 260 ntBASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Gm8498-201ENSMUST00000188227 974 ntBASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Gm37575-201ENSMUST00000195467 309 ntBASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Gm44137-201ENSMUST00000203670 367 ntBASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Gm44266-201ENSMUST00000205235 500 ntBASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Gm45796-201ENSMUST00000212483 114 ntBASIC3.58□□□□□ -1.84
Vps39Q8R5L3 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC3.58□□□□□ -1.84
Vps39Q8R5L3 AC123835.1-201ENSMUST00000214362 670 ntBASIC3.58□□□□□ -1.84
Vps39Q8R5L3 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.58□□□□□ -1.84
Vps39Q8R5L3 AC132384.5-201ENSMUST00000218562 226 ntBASIC3.58□□□□□ -1.84
Vps39Q8R5L3 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.58□□□□□ -1.84
Vps39Q8R5L3 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Snora70-201ENSMUST00000083047 137 ntBASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Vps39Q8R5L3 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Vps39Q8R5L3 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Gm14352-201ENSMUST00000119250 449 ntBASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Gm11704-201ENSMUST00000120031 214 ntBASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Mup-ps15-201ENSMUST00000121741 539 ntBASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Gm22789-201ENSMUST00000157884 130 ntBASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Gm25438-201ENSMUST00000158281 110 ntBASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Gm26362-201ENSMUST00000158865 315 ntBASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Gm27903-201ENSMUST00000175482 126 ntBASIC3.57□□□□□ -1.84
Vps39Q8R5L3 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Gm28011-201ENSMUST00000184097 175 ntBASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Gm27189-201ENSMUST00000184119 190 ntBASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Mir7028-201ENSMUST00000185016 64 ntBASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Gm8242-202ENSMUST00000193056 475 ntBASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Gm43115-201ENSMUST00000196244 160 ntBASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Vps39Q8R5L3 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Gm45379-201ENSMUST00000211772 549 ntBASIC3.57□□□□□ -1.84
Vps39Q8R5L3 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Gm19233-201ENSMUST00000219772 936 ntBASIC3.57□□□□□ -1.84
Vps39Q8R5L3 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.57□□□□□ -1.84
Vps39Q8R5L3 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Gm26439-201ENSMUST00000082592 106 ntBASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Mir346-201ENSMUST00000083547 98 ntBASIC3.57□□□□□ -1.84
Vps39Q8R5L3 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms