Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC3.15□□□□□ -1.91
Ccdc28aQ8CEI3 Gm23716-201ENSMUST00000157348 144 ntBASIC3.15□□□□□ -1.91
Ccdc28aQ8CEI3 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc28aQ8CEI3 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc28aQ8CEI3 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc28aQ8CEI3 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.15□□□□□ -1.91
Ccdc28aQ8CEI3 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc28aQ8CEI3 Gm27700-201ENSMUST00000185003 81 ntBASIC3.15□□□□□ -1.91
Ccdc28aQ8CEI3 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.15□□□□□ -1.91
Ccdc28aQ8CEI3 Gm43393-201ENSMUST00000200147 194 ntBASIC3.15□□□□□ -1.91
Ccdc28aQ8CEI3 Gm44690-201ENSMUST00000207984 382 ntBASIC3.15□□□□□ -1.91
Ccdc28aQ8CEI3 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc28aQ8CEI3 Gm7034-201ENSMUST00000218638 645 ntBASIC3.15□□□□□ -1.91
Ccdc28aQ8CEI3 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.15□□□□□ -1.91
Ccdc28aQ8CEI3 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.15□□□□□ -1.91
Ccdc28aQ8CEI3 AC130547.1-201ENSMUST00000228079 1047 ntBASIC3.15□□□□□ -1.91
Ccdc28aQ8CEI3 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ccdc28aQ8CEI3 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ccdc28aQ8CEI3 Gm25699-201ENSMUST00000082896 167 ntBASIC3.15□□□□□ -1.91
Ccdc28aQ8CEI3 Olfr203-201ENSMUST00000089305 924 ntBASIC3.15□□□□□ -1.91
Ccdc28aQ8CEI3 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.15□□□□□ -1.91
Ccdc28aQ8CEI3 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc28aQ8CEI3 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.15□□□□□ -1.91
Ccdc28aQ8CEI3 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 Gm14253-201ENSMUST00000122112 639 ntBASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 Gm25835-201ENSMUST00000158917 144 ntBASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 Gm16111-201ENSMUST00000162128 285 ntBASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 Spin2g-201ENSMUST00000178425 687 ntBASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 Gm21893-201ENSMUST00000179119 397 ntBASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 Gm27374-201ENSMUST00000183660 81 ntBASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 Gm43316-201ENSMUST00000197252 1295 ntBASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 AC164424.1-201ENSMUST00000221690 170 ntBASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ccdc28aQ8CEI3 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 Gm15190-201ENSMUST00000120855 276 ntBASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 Gm23183-201ENSMUST00000122595 323 ntBASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 Gm23441-201ENSMUST00000157268 127 ntBASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 Gm19898-201ENSMUST00000177490 251 ntBASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 Mir5123-201ENSMUST00000177794 83 ntBASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 Gm5473-201ENSMUST00000179326 642 ntBASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 Gm28146-201ENSMUST00000185517 701 ntBASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 Gm29525-201ENSMUST00000189844 699 ntBASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 Gm19080-201ENSMUST00000196082 550 ntBASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 Gm7624-201ENSMUST00000209702 435 ntBASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 AC154681.1-201ENSMUST00000225876 1735 ntBASIC3.13□□□□□ -1.91
Ccdc28aQ8CEI3 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Snord14c-201ENSMUST00000101927 86 ntBASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Gm12401-201ENSMUST00000118435 228 ntBASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Gm26020-201ENSMUST00000122729 183 ntBASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Gm3160-201ENSMUST00000128343 607 ntBASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Gm23028-201ENSMUST00000158773 265 ntBASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Gm7582-201ENSMUST00000160831 603 ntBASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Gm5268-201ENSMUST00000189212 940 ntBASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Ighv1-79-201ENSMUST00000200152 350 ntBASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Gm25203-202ENSMUST00000200458 216 ntBASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Gm43441-201ENSMUST00000201458 205 ntBASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Gm44084-201ENSMUST00000203947 409 ntBASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Gm4528-201ENSMUST00000207905 551 ntBASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Gm10988-201ENSMUST00000209150 1088 ntBASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Olfr936-202ENSMUST00000216912 937 ntBASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC3.12□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms