Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm23116-201ENSMUST00000158481 67 ntBASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Gm17091-201ENSMUST00000163248 357 ntBASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Gm15143-201ENSMUST00000178180 714 ntBASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Gm22897-201ENSMUST00000197860 128 ntBASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Gm25203-202ENSMUST00000200458 216 ntBASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Gm8106-201ENSMUST00000213123 523 ntBASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Gm46233-201ENSMUST00000217831 449 ntBASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC3.12□□□□□ -1.91
Trub1Q8C0D0 AC122924.1-201ENSMUST00000222044 163 ntBASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Gm25203-201ENSMUST00000082842 215 ntBASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Trub1Q8C0D0 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.12□□□□□ -1.91
Trub1Q8C0D0 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Gm24890-201ENSMUST00000104389 102 ntBASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Gm11483-201ENSMUST00000119839 247 ntBASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Gm15367-201ENSMUST00000122398 1016 ntBASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Gm22646-201ENSMUST00000175130 115 ntBASIC3.11□□□□□ -1.91
Trub1Q8C0D0 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Gm7142-201ENSMUST00000194232 586 ntBASIC3.11□□□□□ -1.91
Trub1Q8C0D0 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Gm42850-201ENSMUST00000202094 201 ntBASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Gm44118-201ENSMUST00000204665 229 ntBASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Gm44157-201ENSMUST00000204720 410 ntBASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trub1Q8C0D0 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Gm8681-201ENSMUST00000219115 618 ntBASIC3.11□□□□□ -1.91
Trub1Q8C0D0 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.11□□□□□ -1.91
Trub1Q8C0D0 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC3.11□□□□□ -1.91
Trub1Q8C0D0 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Gm14162-201ENSMUST00000121985 601 ntBASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Gm14389-201ENSMUST00000140453 241 ntBASIC3.1□□□□□ -1.91
Trub1Q8C0D0 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Gm23168-201ENSMUST00000157156 143 ntBASIC3.1□□□□□ -1.91
Trub1Q8C0D0 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Gm9890-201ENSMUST00000171867 537 ntBASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Gm20651-201ENSMUST00000177219 329 ntBASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Gm28146-201ENSMUST00000185517 701 ntBASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Gm18445-201ENSMUST00000195502 774 ntBASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC3.1□□□□□ -1.91
Trub1Q8C0D0 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Gm44964-201ENSMUST00000207011 273 ntBASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Gm7948-201ENSMUST00000212607 844 ntBASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Gnrh1-202ENSMUST00000223929 428 ntBASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Gm23738-201ENSMUST00000082828 171 ntBASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trub1Q8C0D0 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Trub1Q8C0D0 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.09□□□□□ -1.91
Trub1Q8C0D0 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
Trub1Q8C0D0 Mir693-201ENSMUST00000102187 89 ntBASIC3.09□□□□□ -1.91
Trub1Q8C0D0 Gm14621-201ENSMUST00000117709 689 ntBASIC3.09□□□□□ -1.91
Trub1Q8C0D0 Gm4910-201ENSMUST00000119605 366 ntBASIC3.09□□□□□ -1.91
Trub1Q8C0D0 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.09□□□□□ -1.91
Trub1Q8C0D0 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.09□□□□□ -1.91
Trub1Q8C0D0 Gm24666-201ENSMUST00000158937 167 ntBASIC3.09□□□□□ -1.91
Trub1Q8C0D0 Mir5123-201ENSMUST00000177794 83 ntBASIC3.09□□□□□ -1.91
Trub1Q8C0D0 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Trub1Q8C0D0 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Trub1Q8C0D0 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC3.09□□□□□ -1.91
Trub1Q8C0D0 Gm27796-201ENSMUST00000183863 261 ntBASIC3.09□□□□□ -1.91
Trub1Q8C0D0 Gm18384-201ENSMUST00000195974 808 ntBASIC3.09□□□□□ -1.91
Trub1Q8C0D0 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Trub1Q8C0D0 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms