Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Gm21088-201ENSMUST00000190875 316 ntBASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Gm43649-201ENSMUST00000196596 391 ntBASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Gm22897-202ENSMUST00000197782 127 ntBASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Gm45034-201ENSMUST00000206831 482 ntBASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Gm19196-201ENSMUST00000209258 357 ntBASIC5.85□□□□□ -1.47
Usp40Q8BWR4 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.85□□□□□ -1.47
Usp40Q8BWR4 AC147240.1-201ENSMUST00000218767 431 ntBASIC5.85□□□□□ -1.47
Usp40Q8BWR4 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Gm37639-201ENSMUST00000191623 2785 ntBASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Gm36962-201ENSMUST00000192114 1761 ntBASIC5.85□□□□□ -1.47
Usp40Q8BWR4 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Usp40Q8BWR4 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Mir711-201ENSMUST00000102188 82 ntBASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Gm14385-201ENSMUST00000116315 876 ntBASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Gm23226-201ENSMUST00000116927 103 ntBASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Gm12155-201ENSMUST00000121267 160 ntBASIC5.84□□□□□ -1.47
Usp40Q8BWR4 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Gm17054-201ENSMUST00000169811 259 ntBASIC5.84□□□□□ -1.47
Usp40Q8BWR4 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Gm19280-201ENSMUST00000190191 205 ntBASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Gm9632-201ENSMUST00000195934 643 ntBASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Gm43825-201ENSMUST00000199650 734 ntBASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Gm4501-201ENSMUST00000207330 551 ntBASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Gm4558-201ENSMUST00000207886 521 ntBASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Gm4528-201ENSMUST00000207905 551 ntBASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Gm46146-201ENSMUST00000217483 346 ntBASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Gm8681-201ENSMUST00000219115 618 ntBASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Usp40Q8BWR4 AC168059.1-201ENSMUST00000225846 841 ntBASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Gm23510-201ENSMUST00000083083 163 ntBASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Usp40Q8BWR4 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.84□□□□□ -1.47
Usp40Q8BWR4 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC5.84□□□□□ -1.48
Usp40Q8BWR4 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Usp40Q8BWR4 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Gm42639-201ENSMUST00000197061 1871 ntBASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Usp40Q8BWR4 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Mir467h-201ENSMUST00000116759 121 ntBASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Gm13386-201ENSMUST00000117677 124 ntBASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Gm11813-201ENSMUST00000118586 291 ntBASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Clec2f-201ENSMUST00000121051 374 ntBASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Gm16373-201ENSMUST00000129517 303 ntBASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Gm22156-201ENSMUST00000158409 141 ntBASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Gm25163-201ENSMUST00000158905 104 ntBASIC5.83□□□□□ -1.48
Usp40Q8BWR4 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Gm23215-201ENSMUST00000178153 121 ntBASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Mir6996-201ENSMUST00000183922 61 ntBASIC5.83□□□□□ -1.48
Usp40Q8BWR4 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Usp40Q8BWR4 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Gm19774-201ENSMUST00000190667 114 ntBASIC5.83□□□□□ -1.48
Usp40Q8BWR4 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Gm6105-201ENSMUST00000200580 624 ntBASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Gm19140-201ENSMUST00000209790 421 ntBASIC5.83□□□□□ -1.48
Usp40Q8BWR4 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Gm19599-201ENSMUST00000218898 358 ntBASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Gm2436-201ENSMUST00000219562 774 ntBASIC5.83□□□□□ -1.48
Usp40Q8BWR4 AC174776.1-201ENSMUST00000221509 405 ntBASIC5.83□□□□□ -1.48
Usp40Q8BWR4 AC120540.1-201ENSMUST00000221879 324 ntBASIC5.83□□□□□ -1.48
Usp40Q8BWR4 AC174776.2-201ENSMUST00000222561 405 ntBASIC5.83□□□□□ -1.48
Usp40Q8BWR4 AC138667.2-201ENSMUST00000224880 598 ntBASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Gm21286-201ENSMUST00000098035 545 ntBASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Gm42717-201ENSMUST00000197309 3463 ntBASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Usp40Q8BWR4 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Usp40Q8BWR4 AC162910.1-201ENSMUST00000221219 1723 ntBASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 191.5 ms