Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Ubp1Q811S7 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.33□□□□□ -1.56
Ubp1Q811S7 Gm37192-201ENSMUST00000194479 1348 ntBASIC5.33□□□□□ -1.56
Ubp1Q811S7 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ubp1Q811S7 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Ubp1Q811S7 Mir466j-201ENSMUST00000116876 122 ntBASIC5.33□□□□□ -1.56
Ubp1Q811S7 Gm12245-201ENSMUST00000117266 357 ntBASIC5.33□□□□□ -1.56
Ubp1Q811S7 Gm13273-201ENSMUST00000119737 159 ntBASIC5.33□□□□□ -1.56
Ubp1Q811S7 Gm13717-201ENSMUST00000119868 365 ntBASIC5.33□□□□□ -1.56
Ubp1Q811S7 Gm15807-201ENSMUST00000119880 1128 ntBASIC5.33□□□□□ -1.56
Ubp1Q811S7 Gm25806-201ENSMUST00000122782 122 ntBASIC5.33□□□□□ -1.56
Ubp1Q811S7 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC5.33□□□□□ -1.56
Ubp1Q811S7 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC5.33□□□□□ -1.56
Ubp1Q811S7 Scarna10-201ENSMUST00000158992 325 ntBASIC5.33□□□□□ -1.56
Ubp1Q811S7 Gm2389-201ENSMUST00000160487 189 ntBASIC5.33□□□□□ -1.56
Ubp1Q811S7 Gm6632-201ENSMUST00000168425 954 ntBASIC5.33□□□□□ -1.56
Ubp1Q811S7 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.33□□□□□ -1.56
Ubp1Q811S7 Gm5368-201ENSMUST00000189012 589 ntBASIC5.33□□□□□ -1.56
Ubp1Q811S7 Gm19498-201ENSMUST00000191128 331 ntBASIC5.33□□□□□ -1.56
Ubp1Q811S7 Gm32033-201ENSMUST00000193483 339 ntBASIC5.33□□□□□ -1.56
Ubp1Q811S7 Gm38080-201ENSMUST00000194035 268 ntBASIC5.33□□□□□ -1.56
Ubp1Q811S7 Gm44076-201ENSMUST00000203072 520 ntBASIC5.33□□□□□ -1.56
Ubp1Q811S7 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Ubp1Q811S7 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC5.33□□□□□ -1.56
Ubp1Q811S7 AC129308.2-201ENSMUST00000224588 789 ntBASIC5.33□□□□□ -1.56
Ubp1Q811S7 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Ubp1Q811S7 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.33□□□□□ -1.56
Ubp1Q811S7 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ubp1Q811S7 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ubp1Q811S7 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.33□□□□□ -1.56
Ubp1Q811S7 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Ubp1Q811S7 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.33□□□□□ -1.56
Ubp1Q811S7 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Ubp1Q811S7 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.33□□□□□ -1.56
Ubp1Q811S7 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.33□□□□□ -1.56
Ubp1Q811S7 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm42755-201ENSMUST00000198533 1493 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Ubp1Q811S7 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ubp1Q811S7 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Ubp1Q811S7 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ubp1Q811S7 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Ubp1Q811S7 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ubp1Q811S7 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm22370-201ENSMUST00000102422 83 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm15037-201ENSMUST00000120358 259 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm11200-201ENSMUST00000121698 448 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm14559-201ENSMUST00000121745 496 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm12924-201ENSMUST00000121747 318 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm11403-201ENSMUST00000122195 369 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm22843-201ENSMUST00000157710 134 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm22435-201ENSMUST00000158552 128 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm17086-201ENSMUST00000171346 484 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm28943-201ENSMUST00000186187 615 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm28736-201ENSMUST00000186257 615 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm29401-201ENSMUST00000186690 615 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm29178-204ENSMUST00000186784 615 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm28589-201ENSMUST00000186991 615 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm28936-201ENSMUST00000187153 615 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm29121-201ENSMUST00000187611 615 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm28243-201ENSMUST00000187801 615 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm28844-202ENSMUST00000187977 615 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm29058-201ENSMUST00000189510 615 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm29624-201ENSMUST00000190018 615 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm28780-201ENSMUST00000190223 615 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm28969-211ENSMUST00000190992 615 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm28990-207ENSMUST00000191219 615 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm36468-201ENSMUST00000192119 615 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm31572-201ENSMUST00000193341 615 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm30175-201ENSMUST00000194173 615 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm30858-201ENSMUST00000195516 615 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm43739-201ENSMUST00000198294 307 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.32□□□□□ -1.56
Ubp1Q811S7 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm46190-201ENSMUST00000219650 427 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 AC167229.1-201ENSMUST00000220057 469 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 AC130222.1-201ENSMUST00000221198 256 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC5.32□□□□□ -1.56
Ubp1Q811S7 AC170600.1-201ENSMUST00000228763 277 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm9386-201ENSMUST00000095195 381 ntBASIC5.32□□□□□ -1.56
Ubp1Q811S7 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Ubp1Q811S7 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ubp1Q811S7 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ubp1Q811S7 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Ubp1Q811S7 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
Ubp1Q811S7 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.32□□□□□ -1.56
Ubp1Q811S7 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ubp1Q811S7 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ubp1Q811S7 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ubp1Q811S7 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Ubp1Q811S7 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms