Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.26□□□□□ -1.73
Ubfd1Q78JW9 Gm44742-201ENSMUST00000207190 1412 ntBASIC4.26□□□□□ -1.73
Ubfd1Q78JW9 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ubfd1Q78JW9 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ubfd1Q78JW9 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.26□□□□□ -1.73
Ubfd1Q78JW9 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ubfd1Q78JW9 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ubfd1Q78JW9 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.26□□□□□ -1.73
Ubfd1Q78JW9 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Ubfd1Q78JW9 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ubfd1Q78JW9 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Ubfd1Q78JW9 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Gm14753-201ENSMUST00000118503 246 ntBASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Gm14861-201ENSMUST00000119451 455 ntBASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Gm12739-201ENSMUST00000119769 382 ntBASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Gm13356-201ENSMUST00000121678 335 ntBASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Gm22841-201ENSMUST00000158443 62 ntBASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Mir3104-201ENSMUST00000174911 63 ntBASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Gm25194-201ENSMUST00000177987 79 ntBASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Gm29413-201ENSMUST00000186019 880 ntBASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Gm29639-201ENSMUST00000188375 580 ntBASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Gm17953-201ENSMUST00000192061 667 ntBASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Gm18296-201ENSMUST00000192475 783 ntBASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Gm43487-201ENSMUST00000200331 1031 ntBASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Gm45366-201ENSMUST00000209828 384 ntBASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Gm7753-201ENSMUST00000221007 867 ntBASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 AC154426.1-201ENSMUST00000225614 1132 ntBASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Gm23928-201ENSMUST00000082469 145 ntBASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Gm26108-201ENSMUST00000083973 191 ntBASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ubfd1Q78JW9 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm37598-201ENSMUST00000194506 1301 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Snora64-201ENSMUST00000104521 134 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm25507-201ENSMUST00000116981 144 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm12760-201ENSMUST00000117861 482 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm11876-201ENSMUST00000120002 269 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm25606-201ENSMUST00000158363 95 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm22584-201ENSMUST00000177935 92 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Mir6537-201ENSMUST00000184150 110 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm28146-201ENSMUST00000185517 701 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm28574-201ENSMUST00000185757 699 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 131 ms