Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm29573-201ENSMUST00000190291 919 ntBASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm29288-201ENSMUST00000191582 901 ntBASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm37343-201ENSMUST00000192542 111 ntBASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm36974-201ENSMUST00000194200 1071 ntBASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm17781-201ENSMUST00000195232 649 ntBASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm44212-201ENSMUST00000205016 897 ntBASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.8□□□□□ -1.64
Ddx58Q6Q899 AC121844.1-201ENSMUST00000218706 137 ntBASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm18120-201ENSMUST00000220079 511 ntBASIC4.8□□□□□ -1.64
Ddx58Q6Q899 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.8□□□□□ -1.64
Ddx58Q6Q899 CT009550.5-201ENSMUST00000226286 382 ntBASIC4.8□□□□□ -1.64
Ddx58Q6Q899 AC117588.3-201ENSMUST00000228517 325 ntBASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Mir582-201ENSMUST00000103758 81 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Gm24608-201ENSMUST00000104381 136 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Mup-ps14-201ENSMUST00000118437 532 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Gm11600-201ENSMUST00000119592 240 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Mup-ps10-201ENSMUST00000119626 556 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Gm15926-201ENSMUST00000120492 550 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Gm5123-201ENSMUST00000121905 837 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Gm5755-201ENSMUST00000152394 837 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Gm6182-201ENSMUST00000156439 1208 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Gm23084-201ENSMUST00000157850 114 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Gm23781-201ENSMUST00000157940 308 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Gm26001-201ENSMUST00000157989 103 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Gm24898-201ENSMUST00000158133 106 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Gm24550-201ENSMUST00000158648 279 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Gm22307-201ENSMUST00000180019 107 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Gm27861-201ENSMUST00000183920 214 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Gm28552-201ENSMUST00000190725 388 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Gm37111-201ENSMUST00000193250 634 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Gm43810-201ENSMUST00000201018 232 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Gm7786-201ENSMUST00000210494 436 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ddx58Q6Q899 AC141642.1-201ENSMUST00000220598 229 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 AC153662.1-201ENSMUST00000222220 270 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 AC173481.1-201ENSMUST00000223351 270 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 AC154358.1-201ENSMUST00000224871 218 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 AC115878.1-201ENSMUST00000227247 334 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Gm37143-201ENSMUST00000195180 3259 ntBASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ddx58Q6Q899 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
Ddx58Q6Q899 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ddx58Q6Q899 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ddx58Q6Q899 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ddx58Q6Q899 Gm43498-201ENSMUST00000202002 1486 ntBASIC4.78□□□□□ -1.64
Ddx58Q6Q899 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ddx58Q6Q899 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Ddx58Q6Q899 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ddx58Q6Q899 Gm16445-201ENSMUST00000120399 714 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 138.2 ms