Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC4.36□□□□□ -1.71
CtcfQ61164 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CtcfQ61164 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CtcfQ61164 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CtcfQ61164 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CtcfQ61164 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.35□□□□□ -1.71
CtcfQ61164 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CtcfQ61164 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC4.35□□□□□ -1.71
CtcfQ61164 Gm15854-201ENSMUST00000118879 808 ntBASIC4.35□□□□□ -1.71
CtcfQ61164 Gm7363-201ENSMUST00000119883 399 ntBASIC4.35□□□□□ -1.71
CtcfQ61164 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC4.35□□□□□ -1.71
CtcfQ61164 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CtcfQ61164 Gm12226-201ENSMUST00000144172 876 ntBASIC4.35□□□□□ -1.71
CtcfQ61164 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CtcfQ61164 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CtcfQ61164 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CtcfQ61164 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CtcfQ61164 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CtcfQ61164 Gm28956-201ENSMUST00000189047 427 ntBASIC4.35□□□□□ -1.71
CtcfQ61164 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CtcfQ61164 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CtcfQ61164 Gm28211-201ENSMUST00000190920 315 ntBASIC4.35□□□□□ -1.71
CtcfQ61164 Gm28927-201ENSMUST00000191528 272 ntBASIC4.35□□□□□ -1.71
CtcfQ61164 Gm36964-201ENSMUST00000191876 198 ntBASIC4.35□□□□□ -1.71
CtcfQ61164 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.35□□□□□ -1.71
CtcfQ61164 Gm7142-201ENSMUST00000194232 586 ntBASIC4.35□□□□□ -1.71
CtcfQ61164 Gm17771-201ENSMUST00000194477 1147 ntBASIC4.35□□□□□ -1.71
CtcfQ61164 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC4.35□□□□□ -1.71
CtcfQ61164 Gm43431-201ENSMUST00000198577 340 ntBASIC4.35□□□□□ -1.71
CtcfQ61164 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.35□□□□□ -1.71
CtcfQ61164 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.35□□□□□ -1.71
CtcfQ61164 Gm44871-201ENSMUST00000207821 497 ntBASIC4.35□□□□□ -1.71
CtcfQ61164 Gm5338-201ENSMUST00000209530 639 ntBASIC4.35□□□□□ -1.71
CtcfQ61164 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC4.35□□□□□ -1.71
CtcfQ61164 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC4.35□□□□□ -1.71
CtcfQ61164 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC4.35□□□□□ -1.71
CtcfQ61164 Gm3829-201ENSMUST00000222362 619 ntBASIC4.35□□□□□ -1.71
CtcfQ61164 AC154358.1-201ENSMUST00000224871 218 ntBASIC4.35□□□□□ -1.71
CtcfQ61164 AC117814.1-201ENSMUST00000226135 352 ntBASIC4.35□□□□□ -1.71
CtcfQ61164 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CtcfQ61164 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CtcfQ61164 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CtcfQ61164 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CtcfQ61164 Gm26449-201ENSMUST00000082452 104 ntBASIC4.35□□□□□ -1.71
CtcfQ61164 AC159188.2-201ENSMUST00000224103 1301 ntBASIC4.35□□□□□ -1.71
CtcfQ61164 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CtcfQ61164 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CtcfQ61164 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CtcfQ61164 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.35□□□□□ -1.71
CtcfQ61164 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CtcfQ61164 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CtcfQ61164 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CtcfQ61164 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CtcfQ61164 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CtcfQ61164 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CtcfQ61164 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.34□□□□□ -1.71
CtcfQ61164 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
CtcfQ61164 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CtcfQ61164 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CtcfQ61164 Gm24318-201ENSMUST00000104490 131 ntBASIC4.34□□□□□ -1.71
CtcfQ61164 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CtcfQ61164 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.34□□□□□ -1.71
CtcfQ61164 Gm12294-201ENSMUST00000119723 490 ntBASIC4.34□□□□□ -1.71
CtcfQ61164 Gm12873-201ENSMUST00000119988 422 ntBASIC4.34□□□□□ -1.71
CtcfQ61164 Gm12770-201ENSMUST00000121734 462 ntBASIC4.34□□□□□ -1.71
CtcfQ61164 Gm13852-201ENSMUST00000122350 242 ntBASIC4.34□□□□□ -1.71
CtcfQ61164 Gm14903-201ENSMUST00000122435 537 ntBASIC4.34□□□□□ -1.71
CtcfQ61164 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CtcfQ61164 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC4.34□□□□□ -1.71
CtcfQ61164 Gm20673-201ENSMUST00000177167 430 ntBASIC4.34□□□□□ -1.71
CtcfQ61164 Gm5974-201ENSMUST00000181607 986 ntBASIC4.34□□□□□ -1.71
CtcfQ61164 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC4.34□□□□□ -1.71
CtcfQ61164 Mir6391-201ENSMUST00000184391 104 ntBASIC4.34□□□□□ -1.71
CtcfQ61164 Gm28390-201ENSMUST00000185212 700 ntBASIC4.34□□□□□ -1.71
CtcfQ61164 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC4.34□□□□□ -1.71
CtcfQ61164 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC4.34□□□□□ -1.71
CtcfQ61164 Gm28997-201ENSMUST00000188759 429 ntBASIC4.34□□□□□ -1.71
CtcfQ61164 Gm29641-201ENSMUST00000188955 259 ntBASIC4.34□□□□□ -1.71
CtcfQ61164 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CtcfQ61164 Gm19224-201ENSMUST00000190477 793 ntBASIC4.34□□□□□ -1.71
CtcfQ61164 Gm37111-201ENSMUST00000193250 634 ntBASIC4.34□□□□□ -1.71
CtcfQ61164 Gm44349-201ENSMUST00000197048 123 ntBASIC4.34□□□□□ -1.71
CtcfQ61164 Gm3010-201ENSMUST00000198805 448 ntBASIC4.34□□□□□ -1.71
CtcfQ61164 Gm18327-201ENSMUST00000202426 830 ntBASIC4.34□□□□□ -1.71
CtcfQ61164 Gm44371-201ENSMUST00000204148 467 ntBASIC4.34□□□□□ -1.71
CtcfQ61164 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC4.34□□□□□ -1.71
CtcfQ61164 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC4.34□□□□□ -1.71
CtcfQ61164 Gm45317-201ENSMUST00000210385 223 ntBASIC4.34□□□□□ -1.71
CtcfQ61164 Gm4052-201ENSMUST00000220890 451 ntBASIC4.34□□□□□ -1.71
CtcfQ61164 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.34□□□□□ -1.71
CtcfQ61164 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CtcfQ61164 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CtcfQ61164 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CtcfQ61164 Gm25403-201ENSMUST00000082971 143 ntBASIC4.34□□□□□ -1.71
CtcfQ61164 Snord22-201ENSMUST00000083153 126 ntBASIC4.34□□□□□ -1.71
CtcfQ61164 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CtcfQ61164 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC4.34□□□□□ -1.71
CtcfQ61164 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CtcfQ61164 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CtcfQ61164 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms