Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm23133-201ENSMUST00000104255 135 ntBASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Gm14588-201ENSMUST00000119895 172 ntBASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Gm14008-201ENSMUST00000120483 274 ntBASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Gm12723-201ENSMUST00000120700 451 ntBASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 n-R5s191-201ENSMUST00000122724 116 ntBASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Mir1927-201ENSMUST00000158579 109 ntBASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Gm21893-201ENSMUST00000179119 397 ntBASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Gm44456-201ENSMUST00000196554 89 ntBASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Gm19096-201ENSMUST00000209705 766 ntBASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Gm4928-201ENSMUST00000219622 850 ntBASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 AC122194.1-201ENSMUST00000220549 293 ntBASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Gm3829-201ENSMUST00000222362 619 ntBASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 AC156790.5-201ENSMUST00000227075 231 ntBASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Gm44624-201ENSMUST00000208700 2278 ntBASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Gm42870-201ENSMUST00000199355 3470 ntBASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Gm37895-201ENSMUST00000192448 4550 ntBASIC1.96□□□□□ -2.09
Trav3-1Q5R1I8 AC154184.1-201ENSMUST00000224375 1620 ntBASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Gm6429-201ENSMUST00000117144 475 ntBASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Gm13973-201ENSMUST00000121371 894 ntBASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Gm11403-201ENSMUST00000122195 369 ntBASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Gm24436-201ENSMUST00000157889 302 ntBASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Gm17064-201ENSMUST00000167690 452 ntBASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Mir7211-201ENSMUST00000184071 63 ntBASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Gm29228-201ENSMUST00000185489 418 ntBASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Gm28785-201ENSMUST00000187478 379 ntBASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Gm37701-201ENSMUST00000192947 1100 ntBASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Gm43550-201ENSMUST00000200597 303 ntBASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Gm8942-201ENSMUST00000217892 400 ntBASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 CT030159.4-201ENSMUST00000221966 395 ntBASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 AC124581.4-201ENSMUST00000225874 463 ntBASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 AC158981.3-201ENSMUST00000226844 1024 ntBASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Gm22507-201ENSMUST00000082773 160 ntBASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 n-R5s196-201ENSMUST00000083136 117 ntBASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Mir383-201ENSMUST00000083523 70 ntBASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 AC126673.3-201ENSMUST00000223414 3829 ntBASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC1.96□□□□□ -2.1
Trav3-1Q5R1I8 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 Gm45178-201ENSMUST00000207744 4110 ntBASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 n-R5s172-201ENSMUST00000104508 114 ntBASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 Gm23910-201ENSMUST00000104597 132 ntBASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 Gm15613-201ENSMUST00000118396 326 ntBASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 Gm14602-201ENSMUST00000118625 340 ntBASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 Gm13745-201ENSMUST00000121994 527 ntBASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 Gm23539-201ENSMUST00000157537 224 ntBASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 Gm22532-201ENSMUST00000158822 140 ntBASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 Gm15796-201ENSMUST00000162135 204 ntBASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 Gm18354-201ENSMUST00000173515 1068 ntBASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 Gm26950-201ENSMUST00000182734 498 ntBASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 Mir7232-201ENSMUST00000197929 74 ntBASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 Gm45427-201ENSMUST00000209572 1253 ntBASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 Gm45696-201ENSMUST00000212088 985 ntBASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 Gm18043-201ENSMUST00000216741 739 ntBASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Trav3-1Q5R1I8 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 105.5 ms