Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC4.03□□□□□ -1.76
Trim58Q5NCC9 Gm28926-201ENSMUST00000191063 680 ntBASIC4.03□□□□□ -1.76
Trim58Q5NCC9 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trim58Q5NCC9 Gm44395-201ENSMUST00000197056 153 ntBASIC4.03□□□□□ -1.76
Trim58Q5NCC9 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trim58Q5NCC9 Gm45474-201ENSMUST00000209471 408 ntBASIC4.03□□□□□ -1.76
Trim58Q5NCC9 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC4.03□□□□□ -1.76
Trim58Q5NCC9 AF357341-201ENSMUST00000083088 75 ntBASIC4.03□□□□□ -1.76
Trim58Q5NCC9 Gm23815-201ENSMUST00000083231 107 ntBASIC4.03□□□□□ -1.76
Trim58Q5NCC9 Gm23520-201ENSMUST00000093736 107 ntBASIC4.03□□□□□ -1.76
Trim58Q5NCC9 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
Trim58Q5NCC9 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.77
Trim58Q5NCC9 AC124562.2-201ENSMUST00000223888 2313 ntBASIC4.03□□□□□ -1.77
Trim58Q5NCC9 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim58Q5NCC9 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trim58Q5NCC9 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim58Q5NCC9 AC124586.1-201ENSMUST00000221673 2795 ntBASIC4.02□□□□□ -1.77
Trim58Q5NCC9 Gm11874-201ENSMUST00000117437 130 ntBASIC4.02□□□□□ -1.77
Trim58Q5NCC9 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC4.02□□□□□ -1.77
Trim58Q5NCC9 Gm14647-201ENSMUST00000119392 680 ntBASIC4.02□□□□□ -1.77
Trim58Q5NCC9 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC4.02□□□□□ -1.77
Trim58Q5NCC9 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC4.02□□□□□ -1.77
Trim58Q5NCC9 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trim58Q5NCC9 Snora81-201ENSMUST00000157310 178 ntBASIC4.02□□□□□ -1.77
Trim58Q5NCC9 Gm24213-201ENSMUST00000158255 258 ntBASIC4.02□□□□□ -1.77
Trim58Q5NCC9 Gm17075-201ENSMUST00000171924 670 ntBASIC4.02□□□□□ -1.77
Trim58Q5NCC9 Gm26061-201ENSMUST00000175584 108 ntBASIC4.02□□□□□ -1.77
Trim58Q5NCC9 Mir8096-201ENSMUST00000184526 127 ntBASIC4.02□□□□□ -1.77
Trim58Q5NCC9 Gm28655-201ENSMUST00000191538 692 ntBASIC4.02□□□□□ -1.77
Trim58Q5NCC9 Gm6140-201ENSMUST00000192494 966 ntBASIC4.02□□□□□ -1.77
Trim58Q5NCC9 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC4.02□□□□□ -1.77
Trim58Q5NCC9 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC4.02□□□□□ -1.77
Trim58Q5NCC9 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC4.02□□□□□ -1.77
Trim58Q5NCC9 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC4.02□□□□□ -1.77
Trim58Q5NCC9 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC4.02□□□□□ -1.77
Trim58Q5NCC9 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC4.02□□□□□ -1.77
Trim58Q5NCC9 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC4.02□□□□□ -1.77
Trim58Q5NCC9 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Trim58Q5NCC9 Gm24147-201ENSMUST00000082763 144 ntBASIC4.02□□□□□ -1.77
Trim58Q5NCC9 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Trim58Q5NCC9 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Trim58Q5NCC9 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trim58Q5NCC9 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim58Q5NCC9 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC4.01□□□□□ -1.77
Trim58Q5NCC9 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim58Q5NCC9 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim58Q5NCC9 Gm12805-201ENSMUST00000117305 1048 ntBASIC4.01□□□□□ -1.77
Trim58Q5NCC9 Gm26020-201ENSMUST00000122729 183 ntBASIC4.01□□□□□ -1.77
Trim58Q5NCC9 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC4.01□□□□□ -1.77
Trim58Q5NCC9 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trim58Q5NCC9 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim58Q5NCC9 Gm28155-201ENSMUST00000191066 151 ntBASIC4.01□□□□□ -1.77
Trim58Q5NCC9 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC4.01□□□□□ -1.77
Trim58Q5NCC9 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC4.01□□□□□ -1.77
Trim58Q5NCC9 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC4.01□□□□□ -1.77
Trim58Q5NCC9 Gm37193-201ENSMUST00000193087 513 ntBASIC4.01□□□□□ -1.77
Trim58Q5NCC9 Gm9931-201ENSMUST00000193584 1185 ntBASIC4.01□□□□□ -1.77
Trim58Q5NCC9 Gm44387-201ENSMUST00000196298 145 ntBASIC4.01□□□□□ -1.77
Trim58Q5NCC9 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC4.01□□□□□ -1.77
Trim58Q5NCC9 Gm7624-201ENSMUST00000209702 435 ntBASIC4.01□□□□□ -1.77
Trim58Q5NCC9 AC159476.2-201ENSMUST00000216221 418 ntBASIC4.01□□□□□ -1.77
Trim58Q5NCC9 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC4.01□□□□□ -1.77
Trim58Q5NCC9 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim58Q5NCC9 Gm5185-201ENSMUST00000080271 619 ntBASIC4.01□□□□□ -1.77
Trim58Q5NCC9 Gm23925-201ENSMUST00000082471 132 ntBASIC4.01□□□□□ -1.77
Trim58Q5NCC9 Gm25004-201ENSMUST00000083811 161 ntBASIC4.01□□□□□ -1.77
Trim58Q5NCC9 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trim58Q5NCC9 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC4□□□□□ -1.77
Trim58Q5NCC9 CT025577.1-201ENSMUST00000220862 2846 ntBASIC4□□□□□ -1.77
Trim58Q5NCC9 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trim58Q5NCC9 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Trim58Q5NCC9 Gm21033-201ENSMUST00000208590 2608 ntBASIC4□□□□□ -1.77
Trim58Q5NCC9 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trim58Q5NCC9 n-R5s31-201ENSMUST00000104162 110 ntBASIC4□□□□□ -1.77
Trim58Q5NCC9 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC4□□□□□ -1.77
Trim58Q5NCC9 Gm13059-201ENSMUST00000119881 398 ntBASIC4□□□□□ -1.77
Trim58Q5NCC9 Gm12515-201ENSMUST00000120116 361 ntBASIC4□□□□□ -1.77
Trim58Q5NCC9 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4□□□□□ -1.77
Trim58Q5NCC9 Gm6762-201ENSMUST00000121769 289 ntBASIC4□□□□□ -1.77
Trim58Q5NCC9 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4□□□□□ -1.77
Trim58Q5NCC9 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC4□□□□□ -1.77
Trim58Q5NCC9 Gm8224-201ENSMUST00000166178 497 ntBASIC4□□□□□ -1.77
Trim58Q5NCC9 Gm17038-201ENSMUST00000166586 494 ntBASIC4□□□□□ -1.77
Trim58Q5NCC9 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC4□□□□□ -1.77
Trim58Q5NCC9 Gm27155-201ENSMUST00000183716 898 ntBASIC4□□□□□ -1.77
Trim58Q5NCC9 Gm27893-201ENSMUST00000184408 194 ntBASIC4□□□□□ -1.77
Trim58Q5NCC9 Gm18505-201ENSMUST00000187360 790 ntBASIC4□□□□□ -1.77
Trim58Q5NCC9 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC4□□□□□ -1.77
Trim58Q5NCC9 Gm9541-201ENSMUST00000188409 502 ntBASIC4□□□□□ -1.77
Trim58Q5NCC9 Gm37098-201ENSMUST00000192290 244 ntBASIC4□□□□□ -1.77
Trim58Q5NCC9 Gm36985-201ENSMUST00000195595 379 ntBASIC4□□□□□ -1.77
Trim58Q5NCC9 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC4□□□□□ -1.77
Trim58Q5NCC9 Gm44084-201ENSMUST00000203947 409 ntBASIC4□□□□□ -1.77
Trim58Q5NCC9 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4□□□□□ -1.77
Trim58Q5NCC9 Gm17987-201ENSMUST00000206902 603 ntBASIC4□□□□□ -1.77
Trim58Q5NCC9 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC4□□□□□ -1.77
Trim58Q5NCC9 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC4□□□□□ -1.77
Trim58Q5NCC9 Gm8942-201ENSMUST00000217892 400 ntBASIC4□□□□□ -1.77
Trim58Q5NCC9 AC153564.2-201ENSMUST00000219464 273 ntBASIC4□□□□□ -1.77
Trim58Q5NCC9 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms