Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm16060-201ENSMUST00000153140 478 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm22529-201ENSMUST00000158817 123 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Mir3062-201ENSMUST00000174986 105 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm27342-201ENSMUST00000183530 109 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm8403-201ENSMUST00000189712 1298 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm37088-201ENSMUST00000193887 406 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Igkv12-47-201ENSMUST00000196961 356 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm43142-201ENSMUST00000198670 361 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm43004-201ENSMUST00000201872 703 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm17893-201ENSMUST00000203017 770 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm45071-201ENSMUST00000205353 571 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm20039-201ENSMUST00000210329 394 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Trim40Q3UWA4 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm3565-201ENSMUST00000222670 609 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm40598-201ENSMUST00000222953 547 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Snora70-201ENSMUST00000083047 137 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 n-R5s196-201ENSMUST00000083136 117 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm22578-201ENSMUST00000083730 107 ntBASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
Trim40Q3UWA4 Gm43871-201ENSMUST00000204931 1955 ntBASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Gm11645-201ENSMUST00000121589 649 ntBASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Gm25555-201ENSMUST00000158078 111 ntBASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Gm16101-201ENSMUST00000160695 430 ntBASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Gm18358-201ENSMUST00000173179 1277 ntBASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Gm6155-201ENSMUST00000173735 341 ntBASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Gm37213-201ENSMUST00000193077 586 ntBASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Trim40Q3UWA4 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Gm43370-201ENSMUST00000196437 284 ntBASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Gm45434-201ENSMUST00000210550 293 ntBASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Gm18644-201ENSMUST00000211458 815 ntBASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Gm18507-201ENSMUST00000218855 525 ntBASIC3.47□□□□□ -1.85
Trim40Q3UWA4 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC3.47□□□□□ -1.85
Trim40Q3UWA4 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Gm2544-201ENSMUST00000222702 756 ntBASIC3.47□□□□□ -1.85
Trim40Q3UWA4 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.47□□□□□ -1.85
Trim40Q3UWA4 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.47□□□□□ -1.85
Trim40Q3UWA4 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Gm24928-201ENSMUST00000083399 107 ntBASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Gm25897-201ENSMUST00000083709 107 ntBASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Trim40Q3UWA4 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Gm43092-201ENSMUST00000202986 1854 ntBASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Trim40Q3UWA4 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Trim40Q3UWA4 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
Trim40Q3UWA4 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
Trim40Q3UWA4 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Gm14570-201ENSMUST00000119444 391 ntBASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Gm12873-201ENSMUST00000119988 422 ntBASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Trim40Q3UWA4 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Gm22890-201ENSMUST00000158642 144 ntBASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Gm23505-201ENSMUST00000158989 130 ntBASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Gm7241-201ENSMUST00000159853 357 ntBASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Trim40Q3UWA4 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Gm20693-201ENSMUST00000177431 211 ntBASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.46□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms