Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Upf3aQ3ULJ3 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Upf3aQ3ULJ3 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Upf3aQ3ULJ3 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Upf3aQ3ULJ3 Gm28191-201ENSMUST00000189112 211 ntBASIC3.54□□□□□ -1.84
Upf3aQ3ULJ3 Gm38330-201ENSMUST00000192743 959 ntBASIC3.54□□□□□ -1.84
Upf3aQ3ULJ3 Gm43601-201ENSMUST00000196294 945 ntBASIC3.54□□□□□ -1.84
Upf3aQ3ULJ3 Gm17937-201ENSMUST00000197908 742 ntBASIC3.54□□□□□ -1.84
Upf3aQ3ULJ3 Gm42526-201ENSMUST00000198956 393 ntBASIC3.54□□□□□ -1.84
Upf3aQ3ULJ3 Gm31532-201ENSMUST00000203555 767 ntBASIC3.54□□□□□ -1.84
Upf3aQ3ULJ3 Gm45409-201ENSMUST00000211486 252 ntBASIC3.54□□□□□ -1.84
Upf3aQ3ULJ3 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC3.54□□□□□ -1.84
Upf3aQ3ULJ3 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.54□□□□□ -1.84
Upf3aQ3ULJ3 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC3.54□□□□□ -1.84
Upf3aQ3ULJ3 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Upf3aQ3ULJ3 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Upf3aQ3ULJ3 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Upf3aQ3ULJ3 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Upf3aQ3ULJ3 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.54□□□□□ -1.84
Upf3aQ3ULJ3 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Upf3aQ3ULJ3 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Upf3aQ3ULJ3 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Upf3aQ3ULJ3 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 Gm24715-201ENSMUST00000102377 95 ntBASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 Gm12268-201ENSMUST00000118398 442 ntBASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 Gm13314-201ENSMUST00000118742 335 ntBASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 Gm14240-201ENSMUST00000120353 546 ntBASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 Gm13443-201ENSMUST00000120770 555 ntBASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 Gm13692-201ENSMUST00000120774 371 ntBASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 Gm7855-201ENSMUST00000137737 687 ntBASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 Gm25971-201ENSMUST00000158953 286 ntBASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 Atp2b4-208ENSMUST00000167348 243 ntBASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 Gm20672-201ENSMUST00000176605 261 ntBASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 Gm20162-201ENSMUST00000193629 871 ntBASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 Gm7142-201ENSMUST00000194232 586 ntBASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 Gm44964-201ENSMUST00000207011 273 ntBASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 Gm5917-201ENSMUST00000217638 721 ntBASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 AC153801.1-201ENSMUST00000217904 947 ntBASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.53□□□□□ -1.84
Upf3aQ3ULJ3 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.53□□□□□ -1.85
Upf3aQ3ULJ3 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm23942-201ENSMUST00000101956 107 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm11433-201ENSMUST00000118318 228 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm11890-201ENSMUST00000119585 417 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm22036-201ENSMUST00000157279 215 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm18604-201ENSMUST00000172535 558 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm27783-201ENSMUST00000183534 105 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm28574-201ENSMUST00000185757 699 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm28781-201ENSMUST00000185760 696 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm28339-201ENSMUST00000185845 696 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm29062-201ENSMUST00000186032 694 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm29574-201ENSMUST00000186226 696 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm28828-201ENSMUST00000186601 696 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm28057-201ENSMUST00000186603 615 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm28255-201ENSMUST00000187101 694 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm29307-201ENSMUST00000187367 696 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm28397-201ENSMUST00000187970 699 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm28896-201ENSMUST00000188609 696 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm29545-201ENSMUST00000188878 694 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm29339-201ENSMUST00000189613 696 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm28159-201ENSMUST00000190296 696 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm29366-201ENSMUST00000190481 699 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm29407-201ENSMUST00000191468 696 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm37433-201ENSMUST00000192695 678 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm37441-201ENSMUST00000194430 678 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm38107-201ENSMUST00000194873 696 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm44393-201ENSMUST00000197418 138 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm44092-201ENSMUST00000204470 258 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm7726-201ENSMUST00000206241 231 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 AC154467.1-201ENSMUST00000227527 449 ntBASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC3.52□□□□□ -1.85
Upf3aQ3ULJ3 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms