Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Gm15193-201ENSMUST00000120224 865 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Gm12897-201ENSMUST00000120341 250 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Gm14739-201ENSMUST00000120424 802 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Gm23666-201ENSMUST00000158053 116 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Gm6374-201ENSMUST00000159051 788 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Gm24080-201ENSMUST00000175178 232 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Gm27952-201ENSMUST00000184748 105 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Mir6914-201ENSMUST00000184999 69 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Gm9775-201ENSMUST00000189402 331 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Gm38213-201ENSMUST00000193203 173 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Gm36943-201ENSMUST00000194422 282 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Gm29704-201ENSMUST00000196011 253 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Gm42526-201ENSMUST00000198956 393 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Gm43493-201ENSMUST00000199837 202 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Gm44988-201ENSMUST00000203835 1161 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Olfr936-202ENSMUST00000216912 937 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 AC162934.3-201ENSMUST00000223015 841 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 AC118006.2-201ENSMUST00000224167 962 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 AC154467.1-201ENSMUST00000227527 449 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Gm10242-201ENSMUST00000090064 330 ntBASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Trafd1Q3UDK1 Gm7869-201ENSMUST00000121457 1322 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Gm15126-201ENSMUST00000118631 833 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Gm12294-201ENSMUST00000119723 490 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Gm25105-201ENSMUST00000122477 130 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Gm24965-201ENSMUST00000157922 106 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Mir5127-201ENSMUST00000175295 71 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Gm8807-201ENSMUST00000179328 492 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Gm28030-201ENSMUST00000184987 138 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Gm28688-201ENSMUST00000187301 268 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Gm38231-201ENSMUST00000192030 347 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Gm38332-201ENSMUST00000194189 147 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Gm45226-201ENSMUST00000206602 288 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Gm45778-201ENSMUST00000211959 153 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 AL929265.1-201ENSMUST00000213427 125 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Gm18441-201ENSMUST00000223539 617 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 AC124433.2-201ENSMUST00000223867 291 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Gnrh1-202ENSMUST00000223929 428 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 AC154257.2-201ENSMUST00000224166 340 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Gm22864-201ENSMUST00000083950 130 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.45□□□□□ -1.86
Trafd1Q3UDK1 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm13340-201ENSMUST00000117219 1545 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 AC124586.1-201ENSMUST00000221673 2795 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.44□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 112.7 ms