Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm23319-201ENSMUST00000104467 131 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Mir883a-201ENSMUST00000104824 76 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Gm12137-201ENSMUST00000119565 346 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Mup-ps10-201ENSMUST00000119626 556 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Gm8757-201ENSMUST00000119660 372 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Gm25177-201ENSMUST00000122634 117 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Gm25058-201ENSMUST00000157365 128 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Gm26312-201ENSMUST00000157769 165 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Gm26036-201ENSMUST00000158149 144 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Gm17155-201ENSMUST00000165969 473 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Gm25534-201ENSMUST00000175365 125 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Gm25873-201ENSMUST00000180317 107 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Gm3454-201ENSMUST00000185571 412 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Gm31849-201ENSMUST00000220306 375 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 AC122924.2-201ENSMUST00000220799 298 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 AC155305.1-201ENSMUST00000222207 319 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 CR974485.1-201ENSMUST00000222408 402 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 AL672194.1-201ENSMUST00000224841 603 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 AC117814.1-201ENSMUST00000226135 352 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 AC132112.1-201ENSMUST00000226354 505 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Gm10038-201ENSMUST00000077233 441 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Gm22265-201ENSMUST00000082947 116 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Mir26a-2-201ENSMUST00000083496 84 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Gm23733-201ENSMUST00000083750 106 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
Brf2Q3UAW9 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Gm14910-201ENSMUST00000121037 1805 ntBASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Brf2Q3UAW9 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Gm43327-201ENSMUST00000199285 4055 ntBASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Gm23063-201ENSMUST00000102350 93 ntBASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Gm15659-201ENSMUST00000118881 341 ntBASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Gm11943-201ENSMUST00000119473 327 ntBASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Gm6587-201ENSMUST00000120219 613 ntBASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Gm14875-201ENSMUST00000120881 319 ntBASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Gm12639-201ENSMUST00000121400 493 ntBASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC3.82□□□□□ -1.8
Brf2Q3UAW9 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Gm26320-201ENSMUST00000157742 306 ntBASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Gm23505-201ENSMUST00000158989 130 ntBASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Gm5974-201ENSMUST00000181607 986 ntBASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Gm7909-201ENSMUST00000182688 614 ntBASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Gm29045-201ENSMUST00000187278 698 ntBASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Gm20915-201ENSMUST00000191575 663 ntBASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Gm37000-201ENSMUST00000193058 428 ntBASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Gm37088-201ENSMUST00000193887 406 ntBASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Gm45006-201ENSMUST00000206078 690 ntBASIC3.82□□□□□ -1.8
Brf2Q3UAW9 AC157570.3-201ENSMUST00000219281 205 ntBASIC3.82□□□□□ -1.8
Brf2Q3UAW9 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.82□□□□□ -1.8
Brf2Q3UAW9 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.82□□□□□ -1.8
Brf2Q3UAW9 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.82□□□□□ -1.8
Brf2Q3UAW9 AC132918.1-201ENSMUST00000227877 925 ntBASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Gm24446-201ENSMUST00000083982 156 ntBASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Brf2Q3UAW9 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms