Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Gm38212-201ENSMUST00000194081 2756 ntBASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 AC159193.2-201ENSMUST00000220865 4251 ntBASIC5.25□□□□□ -1.57
Ddb1Q3U1J4 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm44527-202ENSMUST00000204519 1314 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm38699-201ENSMUST00000221301 1740 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm25765-201ENSMUST00000104100 132 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm22771-201ENSMUST00000104449 91 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Clec2f-201ENSMUST00000121051 374 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm12706-201ENSMUST00000121588 698 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm14977-201ENSMUST00000121626 812 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm24910-201ENSMUST00000157289 272 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm23667-201ENSMUST00000157466 120 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm24402-201ENSMUST00000157873 91 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm22733-201ENSMUST00000158094 91 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm26983-201ENSMUST00000182051 388 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm6501-201ENSMUST00000187178 916 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm17777-201ENSMUST00000189740 1276 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm28211-201ENSMUST00000190920 315 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm5983-201ENSMUST00000197739 770 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm43825-201ENSMUST00000199650 734 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm44765-201ENSMUST00000206927 601 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm17991-201ENSMUST00000208139 297 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 CT025680.1-201ENSMUST00000217375 375 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 AC154598.1-201ENSMUST00000227079 347 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm25200-201ENSMUST00000083094 130 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm336-201ENSMUST00000186376 1480 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 AC154323.3-201ENSMUST00000226927 1660 ntBASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC5.24□□□□□ -1.57
Ddb1Q3U1J4 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm21037-201ENSMUST00000209086 2608 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm24430-201ENSMUST00000104077 104 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm25876-201ENSMUST00000104329 119 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Mir105-201ENSMUST00000104655 80 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm2318-201ENSMUST00000119623 639 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm12433-201ENSMUST00000119659 255 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm11410-201ENSMUST00000120053 1143 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm2768-201ENSMUST00000121062 250 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm11982-201ENSMUST00000121480 314 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm22960-201ENSMUST00000122517 104 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm22514-201ENSMUST00000122547 308 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm25806-201ENSMUST00000122782 122 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm23121-201ENSMUST00000157653 173 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm23666-201ENSMUST00000158053 116 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm7398-201ENSMUST00000178589 639 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm7375-201ENSMUST00000179232 639 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm3681-201ENSMUST00000179940 639 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Trbv22-201ENSMUST00000191697 291 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm43941-201ENSMUST00000203303 1073 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm19908-201ENSMUST00000204684 391 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm45192-201ENSMUST00000206749 283 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm3829-201ENSMUST00000222362 619 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 AC091783.5-201ENSMUST00000224928 671 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm22739-201ENSMUST00000083437 160 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
Ddb1Q3U1J4 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms