Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ptchd3Q0EEE2 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Ptchd3Q0EEE2 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.58□□□□□ -1.84
Ptchd3Q0EEE2 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Gm22269-201ENSMUST00000104002 130 ntBASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Snord66-201ENSMUST00000104051 75 ntBASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Gm13228-201ENSMUST00000118937 634 ntBASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Gm14898-201ENSMUST00000120202 645 ntBASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Gm14979-201ENSMUST00000121561 1035 ntBASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Gm22613-201ENSMUST00000122679 292 ntBASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Gm23228-201ENSMUST00000157296 270 ntBASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Gm22219-201ENSMUST00000157562 319 ntBASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Gm20693-201ENSMUST00000177431 211 ntBASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Gm10067-201ENSMUST00000179462 348 ntBASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Mir3473f-201ENSMUST00000183743 136 ntBASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Mir7074-201ENSMUST00000183884 63 ntBASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Mir6345-201ENSMUST00000184286 128 ntBASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Gm17951-201ENSMUST00000198536 496 ntBASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Gm18194-201ENSMUST00000210455 481 ntBASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Gm19709-201ENSMUST00000215403 482 ntBASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Gm3829-201ENSMUST00000222362 619 ntBASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Gm24611-201ENSMUST00000083272 107 ntBASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.57□□□□□ -1.84
Ptchd3Q0EEE2 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Gm24125-201ENSMUST00000104105 137 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Gm22493-201ENSMUST00000104494 132 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Gm13379-201ENSMUST00000118053 621 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Gm6584-201ENSMUST00000119671 447 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Gm15387-201ENSMUST00000120421 648 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Gm5963-201ENSMUST00000143451 236 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Gm26556-201ENSMUST00000180645 320 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Gm27445-201ENSMUST00000184484 72 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Gm37164-201ENSMUST00000192809 637 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Gm38329-201ENSMUST00000193473 427 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Gm37416-201ENSMUST00000193596 318 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Gm37709-201ENSMUST00000195074 600 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Gm43848-201ENSMUST00000198060 1247 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Mir5121-201ENSMUST00000198528 74 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Gm44348-201ENSMUST00000200165 122 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Gm18268-201ENSMUST00000208445 943 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Gm17829-201ENSMUST00000219782 344 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 AC147639.1-201ENSMUST00000224216 661 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Gm23518-201ENSMUST00000082835 153 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Gm5518-201ENSMUST00000084171 648 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Gm10212-201ENSMUST00000087884 324 ntBASIC3.56□□□□□ -1.84
Ptchd3Q0EEE2 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ptchd3Q0EEE2 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ptchd3Q0EEE2 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ptchd3Q0EEE2 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ptchd3Q0EEE2 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ptchd3Q0EEE2 Mir208b-201ENSMUST00000104735 77 ntBASIC3.55□□□□□ -1.84
Ptchd3Q0EEE2 Gm12900-201ENSMUST00000120919 573 ntBASIC3.55□□□□□ -1.84
Ptchd3Q0EEE2 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.55□□□□□ -1.84
Ptchd3Q0EEE2 Gm22816-201ENSMUST00000157450 117 ntBASIC3.55□□□□□ -1.84
Ptchd3Q0EEE2 Gm23583-201ENSMUST00000158533 289 ntBASIC3.55□□□□□ -1.84
Ptchd3Q0EEE2 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ptchd3Q0EEE2 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
Ptchd3Q0EEE2 Gm2966-201ENSMUST00000166052 481 ntBASIC3.55□□□□□ -1.84
Ptchd3Q0EEE2 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ptchd3Q0EEE2 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms