Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col9a1Q05722 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
Col9a1Q05722 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.91□□□□□ -1.46
Col9a1Q05722 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC5.91□□□□□ -1.46
Col9a1Q05722 Ap5m1-208ENSMUST00000228238 3514 ntBASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.91□□□□□ -1.46
Col9a1Q05722 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col9a1Q05722 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Col9a1Q05722 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 AC153969.1-201ENSMUST00000214047 2605 ntBASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm22020-201ENSMUST00000104358 136 ntBASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm12112-201ENSMUST00000117772 231 ntBASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.91□□□□□ -1.46
Col9a1Q05722 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm22870-201ENSMUST00000157501 112 ntBASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm27233-201ENSMUST00000184030 307 ntBASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm27611-201ENSMUST00000184690 108 ntBASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm43828-201ENSMUST00000196890 639 ntBASIC5.91□□□□□ -1.46
Col9a1Q05722 Snord80-202ENSMUST00000199023 77 ntBASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC5.91□□□□□ -1.46
Col9a1Q05722 AC168880.2-201ENSMUST00000224488 201 ntBASIC5.91□□□□□ -1.46
Col9a1Q05722 AC122320.1-201ENSMUST00000227233 105 ntBASIC5.91□□□□□ -1.46
Col9a1Q05722 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.91□□□□□ -1.46
Col9a1Q05722 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Col9a1Q05722 Mir32-201ENSMUST00000083610 70 ntBASIC5.91□□□□□ -1.46
Col9a1Q05722 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col9a1Q05722 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC5.91□□□□□ -1.46
Col9a1Q05722 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col9a1Q05722 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Col9a1Q05722 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
Col9a1Q05722 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col9a1Q05722 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.91□□□□□ -1.46
Col9a1Q05722 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Col9a1Q05722 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col9a1Q05722 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col9a1Q05722 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms