Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.59□□□□□ -1.67
Sf3b6P59708 AC151734.1-201ENSMUST00000227023 1740 ntBASIC4.59□□□□□ -1.67
Sf3b6P59708 AC161572.1-201ENSMUST00000227486 640 ntBASIC4.59□□□□□ -1.67
Sf3b6P59708 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Sf3b6P59708 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Sf3b6P59708 Gm22456-201ENSMUST00000082578 125 ntBASIC4.59□□□□□ -1.67
Sf3b6P59708 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Sf3b6P59708 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Sf3b6P59708 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
Sf3b6P59708 AC154573.1-201ENSMUST00000225913 4659 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm14429-201ENSMUST00000121881 2024 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC4.58□□□□□ -1.68
Sf3b6P59708 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sf3b6P59708 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Sf3b6P59708 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm23577-201ENSMUST00000103950 110 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm22266-201ENSMUST00000104011 138 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm14622-201ENSMUST00000117117 468 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm15012-201ENSMUST00000119176 106 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm15490-201ENSMUST00000119894 387 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm14008-201ENSMUST00000120483 274 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm14287-201ENSMUST00000121060 117 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm6956-201ENSMUST00000134724 546 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm23499-201ENSMUST00000157736 268 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm26086-201ENSMUST00000157902 263 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm25714-201ENSMUST00000158626 296 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm6632-201ENSMUST00000168425 954 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 Mir5624-201ENSMUST00000176635 61 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm27409-201ENSMUST00000184727 80 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm2147-201ENSMUST00000193588 639 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm44083-201ENSMUST00000203114 337 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm44336-201ENSMUST00000203696 468 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm44852-201ENSMUST00000207950 369 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 AC166574.3-201ENSMUST00000226725 367 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 AC123665.4-201ENSMUST00000228790 249 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Sf3b6P59708 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Sf3b6P59708 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Sf3b6P59708 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sf3b6P59708 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Sf3b6P59708 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Sf3b6P59708 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sf3b6P59708 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Sf3b6P59708 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Sf3b6P59708 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm37677-201ENSMUST00000194520 7634 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sf3b6P59708 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Sf3b6P59708 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 Gm44164-201ENSMUST00000203605 2561 ntBASIC4.58□□□□□ -1.68
Sf3b6P59708 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sf3b6P59708 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sf3b6P59708 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Sf3b6P59708 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Sf3b6P59708 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Sf3b6P59708 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
Sf3b6P59708 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.57□□□□□ -1.68
Sf3b6P59708 Mir690-201ENSMUST00000102110 109 ntBASIC4.57□□□□□ -1.68
Sf3b6P59708 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.57□□□□□ -1.68
Sf3b6P59708 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sf3b6P59708 Gm13321-201ENSMUST00000117101 400 ntBASIC4.57□□□□□ -1.68
Sf3b6P59708 Gm12237-201ENSMUST00000120158 470 ntBASIC4.57□□□□□ -1.68
Sf3b6P59708 Gm13932-201ENSMUST00000120873 610 ntBASIC4.57□□□□□ -1.68
Sf3b6P59708 Gm24371-201ENSMUST00000122662 267 ntBASIC4.57□□□□□ -1.68
Sf3b6P59708 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.57□□□□□ -1.68
Sf3b6P59708 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Sf3b6P59708 Gm25624-201ENSMUST00000157222 275 ntBASIC4.57□□□□□ -1.68
Sf3b6P59708 Gm23537-201ENSMUST00000157536 330 ntBASIC4.57□□□□□ -1.68
Sf3b6P59708 Gm24395-201ENSMUST00000158139 125 ntBASIC4.57□□□□□ -1.68
Sf3b6P59708 Gm24577-201ENSMUST00000158580 63 ntBASIC4.57□□□□□ -1.68
Sf3b6P59708 Gm24876-201ENSMUST00000158780 92 ntBASIC4.57□□□□□ -1.68
Sf3b6P59708 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Sf3b6P59708 Gm5263-201ENSMUST00000163646 601 ntBASIC4.57□□□□□ -1.68
Sf3b6P59708 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Sf3b6P59708 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sf3b6P59708 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
Sf3b6P59708 Gm27818-201ENSMUST00000184536 159 ntBASIC4.57□□□□□ -1.68
Sf3b6P59708 Gm8600-201ENSMUST00000186320 905 ntBASIC4.57□□□□□ -1.68
Sf3b6P59708 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
Sf3b6P59708 Gm37167-201ENSMUST00000194946 396 ntBASIC4.57□□□□□ -1.68
Sf3b6P59708 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC4.57□□□□□ -1.68
Sf3b6P59708 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC4.57□□□□□ -1.68
Sf3b6P59708 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC4.57□□□□□ -1.68
Sf3b6P59708 AC160031.2-201ENSMUST00000218242 274 ntBASIC4.57□□□□□ -1.68
Sf3b6P59708 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sf3b6P59708 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC4.57□□□□□ -1.68
Sf3b6P59708 Gm9202-201ENSMUST00000223036 437 ntBASIC4.57□□□□□ -1.68
Sf3b6P59708 AC154616.2-201ENSMUST00000227978 398 ntBASIC4.57□□□□□ -1.68
Sf3b6P59708 AC166574.7-201ENSMUST00000228502 704 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms