Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Snrpert-201ENSMUST00000121967 279 ntBASIC4.74□□□□□ -1.65
Ercc3P49135 Gm13868-201ENSMUST00000122411 294 ntBASIC4.74□□□□□ -1.65
Ercc3P49135 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC4.74□□□□□ -1.65
Ercc3P49135 Gm24503-201ENSMUST00000158454 135 ntBASIC4.74□□□□□ -1.65
Ercc3P49135 Gm16290-201ENSMUST00000161175 474 ntBASIC4.74□□□□□ -1.65
Ercc3P49135 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Ercc3P49135 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.74□□□□□ -1.65
Ercc3P49135 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC4.74□□□□□ -1.65
Ercc3P49135 Gm27817-201ENSMUST00000184302 233 ntBASIC4.74□□□□□ -1.65
Ercc3P49135 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.74□□□□□ -1.65
Ercc3P49135 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Ercc3P49135 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Ercc3P49135 Gm8745-201ENSMUST00000207846 782 ntBASIC4.74□□□□□ -1.65
Ercc3P49135 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC4.74□□□□□ -1.65
Ercc3P49135 Gm5358-201ENSMUST00000212814 353 ntBASIC4.74□□□□□ -1.65
Ercc3P49135 AC152951.1-201ENSMUST00000218907 266 ntBASIC4.74□□□□□ -1.65
Ercc3P49135 AC125464.1-201ENSMUST00000228013 512 ntBASIC4.74□□□□□ -1.65
Ercc3P49135 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Ercc3P49135 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Ercc3P49135 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Ercc3P49135 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.74□□□□□ -1.65
Ercc3P49135 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Ercc3P49135 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ercc3P49135 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Ercc3P49135 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Ercc3P49135 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.73□□□□□ -1.65
Ercc3P49135 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.73□□□□□ -1.65
Ercc3P49135 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.73□□□□□ -1.65
Ercc3P49135 Mir1193-201ENSMUST00000116761 121 ntBASIC4.73□□□□□ -1.65
Ercc3P49135 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ercc3P49135 Gm1866-201ENSMUST00000120701 477 ntBASIC4.73□□□□□ -1.65
Ercc3P49135 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC4.73□□□□□ -1.65
Ercc3P49135 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.73□□□□□ -1.65
Ercc3P49135 Gm22794-201ENSMUST00000157228 306 ntBASIC4.73□□□□□ -1.65
Ercc3P49135 Gm2930-201ENSMUST00000170403 474 ntBASIC4.73□□□□□ -1.65
Ercc3P49135 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC4.73□□□□□ -1.65
Ercc3P49135 Gm18416-201ENSMUST00000175635 1003 ntBASIC4.73□□□□□ -1.65
Ercc3P49135 Gm7094-201ENSMUST00000178379 366 ntBASIC4.73□□□□□ -1.65
Ercc3P49135 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Ercc3P49135 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.73□□□□□ -1.65
Ercc3P49135 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC4.73□□□□□ -1.65
Ercc3P49135 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ercc3P49135 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC4.73□□□□□ -1.65
Ercc3P49135 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC4.73□□□□□ -1.65
Ercc3P49135 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC4.73□□□□□ -1.65
Ercc3P49135 Gm43104-201ENSMUST00000197234 311 ntBASIC4.73□□□□□ -1.65
Ercc3P49135 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC4.73□□□□□ -1.65
Ercc3P49135 Gm43424-201ENSMUST00000200484 253 ntBASIC4.73□□□□□ -1.65
Ercc3P49135 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC4.73□□□□□ -1.65
Ercc3P49135 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ercc3P49135 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC4.73□□□□□ -1.65
Ercc3P49135 AC118006.1-201ENSMUST00000224211 501 ntBASIC4.73□□□□□ -1.65
Ercc3P49135 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.73□□□□□ -1.65
Ercc3P49135 AC144819.1-201ENSMUST00000227015 620 ntBASIC4.73□□□□□ -1.65
Ercc3P49135 AC154598.1-201ENSMUST00000227079 347 ntBASIC4.73□□□□□ -1.65
Ercc3P49135 Gm25126-201ENSMUST00000083343 102 ntBASIC4.73□□□□□ -1.65
Ercc3P49135 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Ercc3P49135 Gm43498-201ENSMUST00000202002 1486 ntBASIC4.73□□□□□ -1.65
Ercc3P49135 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Ercc3P49135 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Ercc3P49135 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Ercc3P49135 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.73□□□□□ -1.65
Ercc3P49135 Gm11284-201ENSMUST00000121910 1887 ntBASIC4.73□□□□□ -1.65
Ercc3P49135 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.73□□□□□ -1.65
Ercc3P49135 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ercc3P49135 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.72□□□□□ -1.65
Ercc3P49135 Gm23691-201ENSMUST00000101878 107 ntBASIC4.72□□□□□ -1.65
Ercc3P49135 Gm24318-201ENSMUST00000104490 131 ntBASIC4.72□□□□□ -1.65
Ercc3P49135 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC4.72□□□□□ -1.65
Ercc3P49135 Gm25883-201ENSMUST00000157781 271 ntBASIC4.72□□□□□ -1.65
Ercc3P49135 Gm24898-201ENSMUST00000158133 106 ntBASIC4.72□□□□□ -1.65
Ercc3P49135 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC4.72□□□□□ -1.65
Ercc3P49135 Gm3221-201ENSMUST00000164869 440 ntBASIC4.72□□□□□ -1.65
Ercc3P49135 Gm2855-201ENSMUST00000166765 456 ntBASIC4.72□□□□□ -1.65
Ercc3P49135 Gm20673-201ENSMUST00000177167 430 ntBASIC4.72□□□□□ -1.65
Ercc3P49135 Gm21894-201ENSMUST00000179631 546 ntBASIC4.72□□□□□ -1.65
Ercc3P49135 Mir6345-201ENSMUST00000184286 128 ntBASIC4.72□□□□□ -1.65
Ercc3P49135 Gm8296-201ENSMUST00000185597 524 ntBASIC4.72□□□□□ -1.65
Ercc3P49135 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ercc3P49135 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ercc3P49135 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ercc3P49135 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC4.72□□□□□ -1.65
Ercc3P49135 Mir129b-201ENSMUST00000197461 65 ntBASIC4.72□□□□□ -1.65
Ercc3P49135 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.72□□□□□ -1.65
Ercc3P49135 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ercc3P49135 AC192616.3-201ENSMUST00000220797 1124 ntBASIC4.72□□□□□ -1.65
Ercc3P49135 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ercc3P49135 Gm25200-201ENSMUST00000083094 130 ntBASIC4.72□□□□□ -1.65
Ercc3P49135 Gm24611-201ENSMUST00000083272 107 ntBASIC4.72□□□□□ -1.65
Ercc3P49135 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ercc3P49135 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ercc3P49135 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ercc3P49135 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ercc3P49135 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ercc3P49135 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Ercc3P49135 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Ercc3P49135 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ercc3P49135 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Ercc3P49135 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ercc3P49135 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms