Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm4916-201ENSMUST00000126139 642 ntBASIC5.85□□□□□ -1.47
Rfx1P48377 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Rfx1P48377 Gm24240-201ENSMUST00000157785 135 ntBASIC5.85□□□□□ -1.47
Rfx1P48377 Gm22940-201ENSMUST00000158560 155 ntBASIC5.85□□□□□ -1.47
Rfx1P48377 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC5.85□□□□□ -1.47
Rfx1P48377 Gm20673-201ENSMUST00000177167 430 ntBASIC5.85□□□□□ -1.47
Rfx1P48377 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.85□□□□□ -1.47
Rfx1P48377 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Rfx1P48377 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC5.85□□□□□ -1.47
Rfx1P48377 Gm28385-201ENSMUST00000185671 292 ntBASIC5.85□□□□□ -1.47
Rfx1P48377 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Rfx1P48377 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Rfx1P48377 Gm9134-201ENSMUST00000193186 551 ntBASIC5.85□□□□□ -1.47
Rfx1P48377 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC5.85□□□□□ -1.47
Rfx1P48377 Gm6543-201ENSMUST00000197353 808 ntBASIC5.85□□□□□ -1.47
Rfx1P48377 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC5.85□□□□□ -1.47
Rfx1P48377 Gm5322-201ENSMUST00000206142 699 ntBASIC5.85□□□□□ -1.47
Rfx1P48377 Gm9269-201ENSMUST00000221661 578 ntBASIC5.85□□□□□ -1.47
Rfx1P48377 AC154305.1-201ENSMUST00000224443 450 ntBASIC5.85□□□□□ -1.47
Rfx1P48377 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.85□□□□□ -1.47
Rfx1P48377 AC112935.1-201ENSMUST00000227603 250 ntBASIC5.85□□□□□ -1.47
Rfx1P48377 Gm23645-201ENSMUST00000083228 108 ntBASIC5.85□□□□□ -1.47
Rfx1P48377 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Rfx1P48377 Dbpht2-202ENSMUST00000221311 5341 ntBASIC5.85□□□□□ -1.47
Rfx1P48377 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Rfx1P48377 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Rfx1P48377 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Rfx1P48377 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Rfx1P48377 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
Rfx1P48377 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Rfx1P48377 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Rfx1P48377 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Rfx1P48377 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Rfx1P48377 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Rfx1P48377 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Rfx1P48377 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Rfx1P48377 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Rfx1P48377 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Rfx1P48377 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Rfx1P48377 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Rfx1P48377 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Rfx1P48377 Gm24789-201ENSMUST00000104282 131 ntBASIC5.84□□□□□ -1.47
Rfx1P48377 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Rfx1P48377 Gm22194-201ENSMUST00000116869 95 ntBASIC5.84□□□□□ -1.47
Rfx1P48377 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.84□□□□□ -1.47
Rfx1P48377 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Rfx1P48377 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC5.84□□□□□ -1.47
Rfx1P48377 Gm23121-201ENSMUST00000157653 173 ntBASIC5.84□□□□□ -1.47
Rfx1P48377 Mir5112-201ENSMUST00000174897 60 ntBASIC5.84□□□□□ -1.47
Rfx1P48377 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Rfx1P48377 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.84□□□□□ -1.47
Rfx1P48377 Gm29229-201ENSMUST00000188874 323 ntBASIC5.84□□□□□ -1.47
Rfx1P48377 Gm19193-201ENSMUST00000190263 590 ntBASIC5.84□□□□□ -1.47
Rfx1P48377 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC5.84□□□□□ -1.47
Rfx1P48377 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.84□□□□□ -1.47
Rfx1P48377 Gm42665-201ENSMUST00000202100 586 ntBASIC5.84□□□□□ -1.47
Rfx1P48377 Gm44016-201ENSMUST00000203463 164 ntBASIC5.84□□□□□ -1.47
Rfx1P48377 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC5.84□□□□□ -1.47
Rfx1P48377 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Rfx1P48377 Gm6056-201ENSMUST00000221253 488 ntBASIC5.84□□□□□ -1.47
Rfx1P48377 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Rfx1P48377 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Rfx1P48377 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Rfx1P48377 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.84□□□□□ -1.47
Rfx1P48377 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Rfx1P48377 Gm37661-201ENSMUST00000191863 1550 ntBASIC5.84□□□□□ -1.48
Rfx1P48377 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Rfx1P48377 AC147639.2-202ENSMUST00000224834 1545 ntBASIC5.84□□□□□ -1.48
Rfx1P48377 Gm44433-201ENSMUST00000203540 4832 ntBASIC5.83□□□□□ -1.48
Rfx1P48377 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Rfx1P48377 AC159308.1-201ENSMUST00000216615 1351 ntBASIC5.83□□□□□ -1.48
Rfx1P48377 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Rfx1P48377 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Rfx1P48377 Gm38091-201ENSMUST00000192418 3871 ntBASIC5.83□□□□□ -1.48
Rfx1P48377 Mir19b-1-201ENSMUST00000102301 87 ntBASIC5.83□□□□□ -1.48
Rfx1P48377 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.83□□□□□ -1.48
Rfx1P48377 Gm12803-201ENSMUST00000118907 821 ntBASIC5.83□□□□□ -1.48
Rfx1P48377 Gm16106-201ENSMUST00000119187 294 ntBASIC5.83□□□□□ -1.48
Rfx1P48377 Gm22480-201ENSMUST00000122568 128 ntBASIC5.83□□□□□ -1.48
Rfx1P48377 Gm23537-201ENSMUST00000157536 330 ntBASIC5.83□□□□□ -1.48
Rfx1P48377 Gm22059-201ENSMUST00000157544 104 ntBASIC5.83□□□□□ -1.48
Rfx1P48377 Gm25982-201ENSMUST00000157920 101 ntBASIC5.83□□□□□ -1.48
Rfx1P48377 Gm16353-201ENSMUST00000159458 1223 ntBASIC5.83□□□□□ -1.48
Rfx1P48377 Gm5263-201ENSMUST00000163646 601 ntBASIC5.83□□□□□ -1.48
Rfx1P48377 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Rfx1P48377 Gm28468-201ENSMUST00000188536 615 ntBASIC5.83□□□□□ -1.48
Rfx1P48377 Gm37692-201ENSMUST00000192633 232 ntBASIC5.83□□□□□ -1.48
Rfx1P48377 Mir6375-201ENSMUST00000197176 95 ntBASIC5.83□□□□□ -1.48
Rfx1P48377 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Rfx1P48377 AC122905.2-201ENSMUST00000220325 269 ntBASIC5.83□□□□□ -1.48
Rfx1P48377 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC5.83□□□□□ -1.48
Rfx1P48377 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC5.83□□□□□ -1.48
Rfx1P48377 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.83□□□□□ -1.48
Rfx1P48377 Olfr197-201ENSMUST00000080031 926 ntBASIC5.83□□□□□ -1.48
Rfx1P48377 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.83□□□□□ -1.48
Rfx1P48377 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Rfx1P48377 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Rfx1P48377 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rfx1P48377 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Rfx1P48377 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms