Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm37303-201ENSMUST00000194202 1559 ntBASIC3.36□□□□□ -1.87
Cxcl12P40224 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Cxcl12P40224 Gm43662-201ENSMUST00000198310 2271 ntBASIC3.36□□□□□ -1.87
Cxcl12P40224 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Cxcl12P40224 Gm336-201ENSMUST00000186376 1480 ntBASIC3.35□□□□□ -1.87
Cxcl12P40224 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.35□□□□□ -1.87
Cxcl12P40224 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Cxcl12P40224 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Cxcl12P40224 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Cxcl12P40224 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Cxcl12P40224 Gm23942-201ENSMUST00000101956 107 ntBASIC3.35□□□□□ -1.87
Cxcl12P40224 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Cxcl12P40224 Gm13664-201ENSMUST00000117304 345 ntBASIC3.35□□□□□ -1.87
Cxcl12P40224 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC3.35□□□□□ -1.87
Cxcl12P40224 Gm12448-201ENSMUST00000118852 655 ntBASIC3.35□□□□□ -1.87
Cxcl12P40224 Gm14810-201ENSMUST00000121628 486 ntBASIC3.35□□□□□ -1.87
Cxcl12P40224 Gm16327-201ENSMUST00000137146 228 ntBASIC3.35□□□□□ -1.87
Cxcl12P40224 Gm22646-201ENSMUST00000175130 115 ntBASIC3.35□□□□□ -1.87
Cxcl12P40224 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC3.35□□□□□ -1.87
Cxcl12P40224 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Cxcl12P40224 Gm23963-201ENSMUST00000179603 77 ntBASIC3.35□□□□□ -1.87
Cxcl12P40224 Gm3496-201ENSMUST00000188283 745 ntBASIC3.35□□□□□ -1.87
Cxcl12P40224 Gm43521-201ENSMUST00000197838 255 ntBASIC3.35□□□□□ -1.87
Cxcl12P40224 Gm43107-201ENSMUST00000198729 255 ntBASIC3.35□□□□□ -1.87
Cxcl12P40224 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC3.35□□□□□ -1.87
Cxcl12P40224 Gm43899-201ENSMUST00000203675 246 ntBASIC3.35□□□□□ -1.87
Cxcl12P40224 Gm19366-201ENSMUST00000206996 156 ntBASIC3.35□□□□□ -1.87
Cxcl12P40224 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC3.35□□□□□ -1.87
Cxcl12P40224 Gm18043-201ENSMUST00000216741 739 ntBASIC3.35□□□□□ -1.87
Cxcl12P40224 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC3.35□□□□□ -1.87
Cxcl12P40224 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Cxcl12P40224 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.35□□□□□ -1.87
Cxcl12P40224 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Cxcl12P40224 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Cxcl12P40224 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.35□□□□□ -1.87
Cxcl12P40224 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Cxcl12P40224 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Cxcl12P40224 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC3.34□□□□□ -1.87
Cxcl12P40224 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Cxcl12P40224 Gm45483-201ENSMUST00000209845 1682 ntBASIC3.34□□□□□ -1.87
Cxcl12P40224 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Cxcl12P40224 Gm14890-201ENSMUST00000117660 676 ntBASIC3.34□□□□□ -1.87
Cxcl12P40224 Gm14987-201ENSMUST00000117820 676 ntBASIC3.34□□□□□ -1.87
Cxcl12P40224 Gm12880-201ENSMUST00000120652 494 ntBASIC3.34□□□□□ -1.87
Cxcl12P40224 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.34□□□□□ -1.87
Cxcl12P40224 Gm25966-201ENSMUST00000157169 117 ntBASIC3.34□□□□□ -1.87
Cxcl12P40224 Gm23671-201ENSMUST00000157472 103 ntBASIC3.34□□□□□ -1.87
Cxcl12P40224 Gm22849-201ENSMUST00000157713 307 ntBASIC3.34□□□□□ -1.87
Cxcl12P40224 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Cxcl12P40224 Samd15-201ENSMUST00000169669 1194 ntBASIC3.34□□□□□ -1.87
Cxcl12P40224 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Cxcl12P40224 Gm26988-201ENSMUST00000183296 945 ntBASIC3.34□□□□□ -1.87
Cxcl12P40224 Gm28011-201ENSMUST00000184097 175 ntBASIC3.34□□□□□ -1.87
Cxcl12P40224 Mir6905-201ENSMUST00000184228 70 ntBASIC3.34□□□□□ -1.87
Cxcl12P40224 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC3.34□□□□□ -1.87
Cxcl12P40224 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Cxcl12P40224 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.34□□□□□ -1.87
Cxcl12P40224 Gm38088-201ENSMUST00000195829 241 ntBASIC3.34□□□□□ -1.87
Cxcl12P40224 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.34□□□□□ -1.87
Cxcl12P40224 Gm3690-201ENSMUST00000211341 262 ntBASIC3.34□□□□□ -1.87
Cxcl12P40224 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC3.34□□□□□ -1.87
Cxcl12P40224 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.34□□□□□ -1.87
Cxcl12P40224 AC192088.2-201ENSMUST00000227590 411 ntBASIC3.34□□□□□ -1.87
Cxcl12P40224 AC151907.1-201ENSMUST00000228812 412 ntBASIC3.34□□□□□ -1.87
Cxcl12P40224 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Cxcl12P40224 Gm24319-201ENSMUST00000083389 107 ntBASIC3.34□□□□□ -1.87
Cxcl12P40224 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Cxcl12P40224 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Cxcl12P40224 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.33□□□□□ -1.88
Cxcl12P40224 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Cxcl12P40224 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cxcl12P40224 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.33□□□□□ -1.88
Cxcl12P40224 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Cxcl12P40224 Gm23063-201ENSMUST00000102350 93 ntBASIC3.33□□□□□ -1.88
Cxcl12P40224 Gm9432-201ENSMUST00000117810 759 ntBASIC3.33□□□□□ -1.88
Cxcl12P40224 Gm14589-201ENSMUST00000121640 727 ntBASIC3.33□□□□□ -1.88
Cxcl12P40224 Gm25047-201ENSMUST00000122667 104 ntBASIC3.33□□□□□ -1.88
Cxcl12P40224 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC3.33□□□□□ -1.88
Cxcl12P40224 Gm22664-201ENSMUST00000158719 105 ntBASIC3.33□□□□□ -1.88
Cxcl12P40224 Gm2389-201ENSMUST00000160487 189 ntBASIC3.33□□□□□ -1.88
Cxcl12P40224 Gm16101-201ENSMUST00000160695 430 ntBASIC3.33□□□□□ -1.88
Cxcl12P40224 Gm29534-201ENSMUST00000187328 382 ntBASIC3.33□□□□□ -1.88
Cxcl12P40224 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC3.33□□□□□ -1.88
Cxcl12P40224 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.33□□□□□ -1.88
Cxcl12P40224 Gm43746-201ENSMUST00000200028 317 ntBASIC3.33□□□□□ -1.88
Cxcl12P40224 Gm46234-201ENSMUST00000218702 259 ntBASIC3.33□□□□□ -1.88
Cxcl12P40224 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cxcl12P40224 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cxcl12P40224 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cxcl12P40224 n-R5s182-201ENSMUST00000083889 107 ntBASIC3.33□□□□□ -1.88
Cxcl12P40224 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.33□□□□□ -1.88
Cxcl12P40224 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Cxcl12P40224 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cxcl12P40224 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3.33□□□□□ -1.88
Cxcl12P40224 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cxcl12P40224 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Cxcl12P40224 Gm25647-201ENSMUST00000101832 78 ntBASIC3.32□□□□□ -1.88
Cxcl12P40224 Gm25823-201ENSMUST00000101995 78 ntBASIC3.32□□□□□ -1.88
Cxcl12P40224 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Cxcl12P40224 Gm4596-201ENSMUST00000117197 442 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms