Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 AC117797.2-201ENSMUST00000224419 531 ntBASIC4.34□□□□□ -1.71
Traf1P39428 AC160958.1-201ENSMUST00000224833 368 ntBASIC4.34□□□□□ -1.71
Traf1P39428 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.34□□□□□ -1.71
Traf1P39428 AC121960.3-201ENSMUST00000227077 623 ntBASIC4.34□□□□□ -1.71
Traf1P39428 Gm12582-201ENSMUST00000030555 697 ntBASIC4.34□□□□□ -1.71
Traf1P39428 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Traf1P39428 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC4.34□□□□□ -1.71
Traf1P39428 Gm23104-201ENSMUST00000083722 104 ntBASIC4.34□□□□□ -1.71
Traf1P39428 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Traf1P39428 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Traf1P39428 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.34□□□□□ -1.71
Traf1P39428 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Traf1P39428 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.34□□□□□ -1.72
Traf1P39428 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Traf1P39428 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC4.34□□□□□ -1.72
Traf1P39428 BC051076-202ENSMUST00000199477 2868 ntBASIC4.33□□□□□ -1.72
Traf1P39428 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC4.33□□□□□ -1.72
Traf1P39428 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Traf1P39428 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC4.33□□□□□ -1.72
Traf1P39428 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Traf1P39428 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Traf1P39428 Gm14677-201ENSMUST00000117866 486 ntBASIC4.33□□□□□ -1.72
Traf1P39428 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Traf1P39428 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Traf1P39428 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Traf1P39428 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Traf1P39428 Gm25981-201ENSMUST00000157921 295 ntBASIC4.33□□□□□ -1.72
Traf1P39428 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Traf1P39428 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Traf1P39428 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC4.33□□□□□ -1.72
Traf1P39428 Mir6715-201ENSMUST00000184990 57 ntBASIC4.33□□□□□ -1.72
Traf1P39428 Gm38356-201ENSMUST00000194313 408 ntBASIC4.33□□□□□ -1.72
Traf1P39428 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Traf1P39428 Gm5552-201ENSMUST00000197149 515 ntBASIC4.33□□□□□ -1.72
Traf1P39428 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.33□□□□□ -1.72
Traf1P39428 Gm19243-201ENSMUST00000198592 269 ntBASIC4.33□□□□□ -1.72
Traf1P39428 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC4.33□□□□□ -1.72
Traf1P39428 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Traf1P39428 Gm43228-201ENSMUST00000200735 264 ntBASIC4.33□□□□□ -1.72
Traf1P39428 Gm45245-201ENSMUST00000210082 376 ntBASIC4.33□□□□□ -1.72
Traf1P39428 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC4.33□□□□□ -1.72
Traf1P39428 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Traf1P39428 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.33□□□□□ -1.72
Traf1P39428 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC4.33□□□□□ -1.72
Traf1P39428 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Traf1P39428 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.32□□□□□ -1.72
Traf1P39428 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Traf1P39428 Gm8569-201ENSMUST00000117630 647 ntBASIC4.32□□□□□ -1.72
Traf1P39428 Gm15377-201ENSMUST00000119594 246 ntBASIC4.32□□□□□ -1.72
Traf1P39428 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC4.32□□□□□ -1.72
Traf1P39428 Gm11233-201ENSMUST00000122357 634 ntBASIC4.32□□□□□ -1.72
Traf1P39428 Gm14368-201ENSMUST00000145305 415 ntBASIC4.32□□□□□ -1.72
Traf1P39428 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC4.32□□□□□ -1.72
Traf1P39428 Gm25572-201ENSMUST00000157527 172 ntBASIC4.32□□□□□ -1.72
Traf1P39428 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
Traf1P39428 Gm17030-201ENSMUST00000167016 393 ntBASIC4.32□□□□□ -1.72
Traf1P39428 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.32□□□□□ -1.72
Traf1P39428 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.32□□□□□ -1.72
Traf1P39428 Gm37617-201ENSMUST00000194309 159 ntBASIC4.32□□□□□ -1.72
Traf1P39428 Gm43651-201ENSMUST00000199796 439 ntBASIC4.32□□□□□ -1.72
Traf1P39428 Gm18410-201ENSMUST00000207199 577 ntBASIC4.32□□□□□ -1.72
Traf1P39428 Olfr936-202ENSMUST00000216912 937 ntBASIC4.32□□□□□ -1.72
Traf1P39428 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Traf1P39428 AC126275.1-201ENSMUST00000224881 446 ntBASIC4.32□□□□□ -1.72
Traf1P39428 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.32□□□□□ -1.72
Traf1P39428 AC154640.2-201ENSMUST00000226324 472 ntBASIC4.32□□□□□ -1.72
Traf1P39428 AC137871.2-201ENSMUST00000226482 289 ntBASIC4.32□□□□□ -1.72
Traf1P39428 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.32□□□□□ -1.72
Traf1P39428 Gm23736-201ENSMUST00000082553 75 ntBASIC4.32□□□□□ -1.72
Traf1P39428 Gm25205-201ENSMUST00000082841 103 ntBASIC4.32□□□□□ -1.72
Traf1P39428 Gm23452-201ENSMUST00000083327 107 ntBASIC4.32□□□□□ -1.72
Traf1P39428 Mir350-201ENSMUST00000083639 99 ntBASIC4.32□□□□□ -1.72
Traf1P39428 Mir323-201ENSMUST00000083683 86 ntBASIC4.32□□□□□ -1.72
Traf1P39428 Snord15a-201ENSMUST00000083888 148 ntBASIC4.32□□□□□ -1.72
Traf1P39428 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Traf1P39428 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Traf1P39428 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Traf1P39428 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Traf1P39428 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Traf1P39428 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Traf1P39428 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Traf1P39428 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Traf1P39428 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Traf1P39428 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Traf1P39428 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Traf1P39428 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Traf1P39428 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC4.31□□□□□ -1.72
Traf1P39428 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.31□□□□□ -1.72
Traf1P39428 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Traf1P39428 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Traf1P39428 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Traf1P39428 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Traf1P39428 Mir1193-201ENSMUST00000116761 121 ntBASIC4.31□□□□□ -1.72
Traf1P39428 Gm14879-201ENSMUST00000117308 507 ntBASIC4.31□□□□□ -1.72
Traf1P39428 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC4.31□□□□□ -1.72
Traf1P39428 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC4.31□□□□□ -1.72
Traf1P39428 Gm24754-201ENSMUST00000177997 107 ntBASIC4.31□□□□□ -1.72
Traf1P39428 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.31□□□□□ -1.72
Traf1P39428 Gm27964-201ENSMUST00000185195 62 ntBASIC4.31□□□□□ -1.72
Traf1P39428 Gm8641-201ENSMUST00000186995 826 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms