Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC3.33□□□□□ -1.88
Cd40lgP27548 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Cd40lgP27548 Gm17917-201ENSMUST00000218561 953 ntBASIC3.33□□□□□ -1.88
Cd40lgP27548 Gm18120-201ENSMUST00000220079 511 ntBASIC3.33□□□□□ -1.88
Cd40lgP27548 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.33□□□□□ -1.88
Cd40lgP27548 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.33□□□□□ -1.88
Cd40lgP27548 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.33□□□□□ -1.88
Cd40lgP27548 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cd40lgP27548 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Cd40lgP27548 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cd40lgP27548 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cd40lgP27548 Gm22575-201ENSMUST00000082981 110 ntBASIC3.33□□□□□ -1.88
Cd40lgP27548 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.33□□□□□ -1.88
Cd40lgP27548 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cd40lgP27548 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cd40lgP27548 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cd40lgP27548 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cd40lgP27548 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cd40lgP27548 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Cd40lgP27548 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Cd40lgP27548 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.33□□□□□ -1.88
Cd40lgP27548 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cd40lgP27548 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Cd40lgP27548 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Cd40lgP27548 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cd40lgP27548 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cd40lgP27548 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cd40lgP27548 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.32□□□□□ -1.88
Cd40lgP27548 Gm23084-201ENSMUST00000157850 114 ntBASIC3.32□□□□□ -1.88
Cd40lgP27548 Gm24875-201ENSMUST00000158888 104 ntBASIC3.32□□□□□ -1.88
Cd40lgP27548 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC3.32□□□□□ -1.88
Cd40lgP27548 Gm5929-201ENSMUST00000166883 487 ntBASIC3.32□□□□□ -1.88
Cd40lgP27548 Gm17164-201ENSMUST00000169013 506 ntBASIC3.32□□□□□ -1.88
Cd40lgP27548 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC3.32□□□□□ -1.88
Cd40lgP27548 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cd40lgP27548 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Cd40lgP27548 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.32□□□□□ -1.88
Cd40lgP27548 Gm26933-201ENSMUST00000182320 827 ntBASIC3.32□□□□□ -1.88
Cd40lgP27548 Mir7658-201ENSMUST00000184043 57 ntBASIC3.32□□□□□ -1.88
Cd40lgP27548 Gm27445-201ENSMUST00000184484 72 ntBASIC3.32□□□□□ -1.88
Cd40lgP27548 Gm27392-201ENSMUST00000185041 101 ntBASIC3.32□□□□□ -1.88
Cd40lgP27548 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.32□□□□□ -1.88
Cd40lgP27548 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cd40lgP27548 Gm9931-201ENSMUST00000193584 1185 ntBASIC3.32□□□□□ -1.88
Cd40lgP27548 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.32□□□□□ -1.88
Cd40lgP27548 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cd40lgP27548 Gm19418-201ENSMUST00000197436 580 ntBASIC3.32□□□□□ -1.88
Cd40lgP27548 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC3.32□□□□□ -1.88
Cd40lgP27548 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.32□□□□□ -1.88
Cd40lgP27548 Gm42758-201ENSMUST00000202146 283 ntBASIC3.32□□□□□ -1.88
Cd40lgP27548 Gm7786-201ENSMUST00000210494 436 ntBASIC3.32□□□□□ -1.88
Cd40lgP27548 Gm7380-201ENSMUST00000211599 466 ntBASIC3.32□□□□□ -1.88
Cd40lgP27548 Gm30738-201ENSMUST00000221346 502 ntBASIC3.32□□□□□ -1.88
Cd40lgP27548 AC131068.1-201ENSMUST00000226891 482 ntBASIC3.32□□□□□ -1.88
Cd40lgP27548 Vmn1r89-206ENSMUST00000227319 985 ntBASIC3.32□□□□□ -1.88
Cd40lgP27548 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Cd40lgP27548 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Cd40lgP27548 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Cd40lgP27548 Gm22043-201ENSMUST00000082993 158 ntBASIC3.32□□□□□ -1.88
Cd40lgP27548 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Cd40lgP27548 AC154681.1-201ENSMUST00000225876 1735 ntBASIC3.32□□□□□ -1.88
Cd40lgP27548 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cd40lgP27548 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
Cd40lgP27548 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cd40lgP27548 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cd40lgP27548 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Cd40lgP27548 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.31□□□□□ -1.88
Cd40lgP27548 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.31□□□□□ -1.88
Cd40lgP27548 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cd40lgP27548 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cd40lgP27548 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.31□□□□□ -1.88
Cd40lgP27548 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.31□□□□□ -1.88
Cd40lgP27548 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.31□□□□□ -1.88
Cd40lgP27548 Gm15799-201ENSMUST00000120899 289 ntBASIC3.31□□□□□ -1.88
Cd40lgP27548 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.31□□□□□ -1.88
Cd40lgP27548 Gm22310-201ENSMUST00000157509 116 ntBASIC3.31□□□□□ -1.88
Cd40lgP27548 Gm23123-201ENSMUST00000157648 144 ntBASIC3.31□□□□□ -1.88
Cd40lgP27548 Gm24727-201ENSMUST00000158231 144 ntBASIC3.31□□□□□ -1.88
Cd40lgP27548 Gm16569-201ENSMUST00000160526 314 ntBASIC3.31□□□□□ -1.88
Cd40lgP27548 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cd40lgP27548 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Cd40lgP27548 Gm27189-201ENSMUST00000184119 190 ntBASIC3.31□□□□□ -1.88
Cd40lgP27548 Gm36934-201ENSMUST00000192007 306 ntBASIC3.31□□□□□ -1.88
Cd40lgP27548 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC3.31□□□□□ -1.88
Cd40lgP27548 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.31□□□□□ -1.88
Cd40lgP27548 Gm43155-201ENSMUST00000202661 494 ntBASIC3.31□□□□□ -1.88
Cd40lgP27548 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cd40lgP27548 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.31□□□□□ -1.88
Cd40lgP27548 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.31□□□□□ -1.88
Cd40lgP27548 AC158631.2-201ENSMUST00000219999 478 ntBASIC3.31□□□□□ -1.88
Cd40lgP27548 Gm4036-201ENSMUST00000220842 626 ntBASIC3.31□□□□□ -1.88
Cd40lgP27548 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.31□□□□□ -1.88
Cd40lgP27548 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.31□□□□□ -1.88
Cd40lgP27548 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3.31□□□□□ -1.88
Cd40lgP27548 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cd40lgP27548 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cd40lgP27548 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cd40lgP27548 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Cd40lgP27548 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cd40lgP27548 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms