Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm12578-201ENSMUST00000121244 417 ntBASIC3.15□□□□□ -1.91
P20040 Gm25105-201ENSMUST00000122477 130 ntBASIC3.15□□□□□ -1.91
P20040 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
P20040 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.15□□□□□ -1.91
P20040 Gm24505-201ENSMUST00000157682 126 ntBASIC3.15□□□□□ -1.91
P20040 Gm23084-201ENSMUST00000157850 114 ntBASIC3.15□□□□□ -1.91
P20040 Gm20693-201ENSMUST00000177431 211 ntBASIC3.15□□□□□ -1.91
P20040 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
P20040 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.15□□□□□ -1.91
P20040 Gm27580-201ENSMUST00000183666 149 ntBASIC3.15□□□□□ -1.91
P20040 Gm27773-201ENSMUST00000184087 78 ntBASIC3.15□□□□□ -1.91
P20040 Gm27477-201ENSMUST00000184649 143 ntBASIC3.15□□□□□ -1.91
P20040 Gm37603-201ENSMUST00000192368 219 ntBASIC3.15□□□□□ -1.91
P20040 Trbv8-201ENSMUST00000194020 285 ntBASIC3.15□□□□□ -1.91
P20040 Gm43814-201ENSMUST00000197851 413 ntBASIC3.15□□□□□ -1.91
P20040 AC132384.9-201ENSMUST00000218085 277 ntBASIC3.15□□□□□ -1.91
P20040 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.15□□□□□ -1.91
P20040 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.15□□□□□ -1.91
P20040 Gm18120-201ENSMUST00000220079 511 ntBASIC3.15□□□□□ -1.91
P20040 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC3.15□□□□□ -1.91
P20040 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.15□□□□□ -1.91
P20040 AC102603.1-201ENSMUST00000227481 584 ntBASIC3.15□□□□□ -1.91
P20040 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
P20040 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
P20040 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
P20040 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.15□□□□□ -1.91
P20040 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
P20040 Gm44562-201ENSMUST00000207194 1347 ntBASIC3.15□□□□□ -1.91
P20040 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
P20040 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
P20040 BC051076-202ENSMUST00000199477 2868 ntBASIC3.14□□□□□ -1.91
P20040 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
P20040 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
P20040 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.14□□□□□ -1.91
P20040 Gm25313-201ENSMUST00000101817 116 ntBASIC3.14□□□□□ -1.91
P20040 Gm23532-201ENSMUST00000104569 112 ntBASIC3.14□□□□□ -1.91
P20040 Mir208b-201ENSMUST00000104735 77 ntBASIC3.14□□□□□ -1.91
P20040 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
P20040 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.14□□□□□ -1.91
P20040 Gm13379-201ENSMUST00000118053 621 ntBASIC3.14□□□□□ -1.91
P20040 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.14□□□□□ -1.91
P20040 Gm13314-201ENSMUST00000118742 335 ntBASIC3.14□□□□□ -1.91
P20040 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.14□□□□□ -1.91
P20040 Gm11704-201ENSMUST00000120031 214 ntBASIC3.14□□□□□ -1.91
P20040 Gm15387-201ENSMUST00000120421 648 ntBASIC3.14□□□□□ -1.91
P20040 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.14□□□□□ -1.91
P20040 Gm24059-201ENSMUST00000157493 312 ntBASIC3.14□□□□□ -1.91
P20040 Gm22339-201ENSMUST00000157718 62 ntBASIC3.14□□□□□ -1.91
P20040 Gm23312-201ENSMUST00000158774 102 ntBASIC3.14□□□□□ -1.91
P20040 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.14□□□□□ -1.91
P20040 Gm22367-201ENSMUST00000178930 132 ntBASIC3.14□□□□□ -1.91
P20040 Gm23287-201ENSMUST00000179427 116 ntBASIC3.14□□□□□ -1.91
P20040 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.14□□□□□ -1.91
P20040 Gm24520-201ENSMUST00000179510 110 ntBASIC3.14□□□□□ -1.91
P20040 Gm23143-201ENSMUST00000180137 116 ntBASIC3.14□□□□□ -1.91
P20040 Gm27392-201ENSMUST00000185041 101 ntBASIC3.14□□□□□ -1.91
P20040 Gm37164-201ENSMUST00000192809 637 ntBASIC3.14□□□□□ -1.91
P20040 Gm38329-201ENSMUST00000193473 427 ntBASIC3.14□□□□□ -1.91
P20040 Gm37617-201ENSMUST00000194309 159 ntBASIC3.14□□□□□ -1.91
P20040 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC3.14□□□□□ -1.91
P20040 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC3.14□□□□□ -1.91
P20040 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.14□□□□□ -1.91
P20040 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.14□□□□□ -1.91
P20040 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.14□□□□□ -1.91
P20040 Gm34779-201ENSMUST00000210036 263 ntBASIC3.14□□□□□ -1.91
P20040 Gm8423-201ENSMUST00000211387 607 ntBASIC3.14□□□□□ -1.91
P20040 Gm7380-201ENSMUST00000211599 466 ntBASIC3.14□□□□□ -1.91
P20040 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC3.14□□□□□ -1.91
P20040 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.14□□□□□ -1.91
P20040 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
P20040 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.14□□□□□ -1.91
P20040 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.14□□□□□ -1.91
P20040 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
P20040 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.14□□□□□ -1.91
P20040 Gm18338-201ENSMUST00000222381 560 ntBASIC3.14□□□□□ -1.91
P20040 AC126275.1-201ENSMUST00000224881 446 ntBASIC3.14□□□□□ -1.91
P20040 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
P20040 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.14□□□□□ -1.91
P20040 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
P20040 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
P20040 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
P20040 Gm25205-201ENSMUST00000082841 103 ntBASIC3.14□□□□□ -1.91
P20040 Gm24871-201ENSMUST00000083099 116 ntBASIC3.14□□□□□ -1.91
P20040 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.14□□□□□ -1.91
P20040 Gm5518-201ENSMUST00000084171 648 ntBASIC3.14□□□□□ -1.91
P20040 Rnu5g-201ENSMUST00000093721 116 ntBASIC3.14□□□□□ -1.91
P20040 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
P20040 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC3.14□□□□□ -1.91
P20040 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
P20040 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
P20040 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.14□□□□□ -1.91
P20040 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.14□□□□□ -1.91
P20040 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
P20040 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
P20040 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.13□□□□□ -1.91
P20040 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
P20040 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
P20040 Gm24951-201ENSMUST00000102182 109 ntBASIC3.13□□□□□ -1.91
P20040 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC3.13□□□□□ -1.91
P20040 Gm15018-201ENSMUST00000117090 633 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms