Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Msx1P13297 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.55□□□□□ -1.52
Msx1P13297 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Msx1P13297 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Msx1P13297 Gm18189-201ENSMUST00000218153 1951 ntBASIC5.55□□□□□ -1.52
Msx1P13297 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Msx1P13297 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Msx1P13297 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Msx1P13297 Mir667-201ENSMUST00000102441 92 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Gm26146-201ENSMUST00000104478 185 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Gm11486-201ENSMUST00000107322 478 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Gm22676-201ENSMUST00000116972 129 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Gm15560-201ENSMUST00000117107 643 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Gm15058-201ENSMUST00000117689 458 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Gm7312-201ENSMUST00000118798 469 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Gm6574-201ENSMUST00000120037 362 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Gm11894-201ENSMUST00000121579 328 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Gm5123-201ENSMUST00000121905 837 ntBASIC5.54□□□□□ -1.52
Msx1P13297 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Gm5353-201ENSMUST00000139800 793 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Gm5755-201ENSMUST00000152394 837 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Gm25439-201ENSMUST00000158280 131 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Mir3080-201ENSMUST00000175010 79 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Gm27465-201ENSMUST00000184290 91 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Gm19123-201ENSMUST00000190716 651 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Gm37624-201ENSMUST00000193751 219 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Gm38080-201ENSMUST00000194035 268 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Gm44316-201ENSMUST00000199274 97 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Gm43749-201ENSMUST00000199345 352 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Gm19060-201ENSMUST00000201959 421 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.54□□□□□ -1.52
Msx1P13297 Gm46194-201ENSMUST00000218136 320 ntBASIC5.54□□□□□ -1.52
Msx1P13297 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Snord14e-201ENSMUST00000082857 90 ntBASIC5.54□□□□□ -1.52
Msx1P13297 n-R5s204-201ENSMUST00000082972 119 ntBASIC5.54□□□□□ -1.52
Msx1P13297 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Msx1P13297 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Msx1P13297 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Msx1P13297 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Msx1P13297 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC5.54□□□□□ -1.52
Msx1P13297 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Msx1P13297 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Msx1P13297 Gm37363-201ENSMUST00000192336 2233 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.54□□□□□ -1.52
Msx1P13297 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Msx1P13297 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Msx1P13297 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Msx1P13297 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Msx1P13297 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.53□□□□□ -1.52
Msx1P13297 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.53□□□□□ -1.52
Msx1P13297 Gm43871-201ENSMUST00000204931 1955 ntBASIC5.53□□□□□ -1.52
Msx1P13297 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.53□□□□□ -1.52
Msx1P13297 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Msx1P13297 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC5.53□□□□□ -1.52
Msx1P13297 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Msx1P13297 Mir193b-201ENSMUST00000103784 79 ntBASIC5.53□□□□□ -1.52
Msx1P13297 Gm13770-201ENSMUST00000117149 305 ntBASIC5.53□□□□□ -1.52
Msx1P13297 Gm16242-201ENSMUST00000117741 334 ntBASIC5.53□□□□□ -1.52
Msx1P13297 Gm11737-201ENSMUST00000118713 468 ntBASIC5.53□□□□□ -1.52
Msx1P13297 Gm14977-201ENSMUST00000121626 812 ntBASIC5.53□□□□□ -1.52
Msx1P13297 Gm21893-201ENSMUST00000179119 397 ntBASIC5.53□□□□□ -1.52
Msx1P13297 Mir6393-201ENSMUST00000183709 94 ntBASIC5.53□□□□□ -1.52
Msx1P13297 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Msx1P13297 Mir7661-201ENSMUST00000197023 61 ntBASIC5.53□□□□□ -1.52
Msx1P13297 Gm43402-201ENSMUST00000197159 159 ntBASIC5.53□□□□□ -1.52
Msx1P13297 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC5.53□□□□□ -1.52
Msx1P13297 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.53□□□□□ -1.52
Msx1P13297 Gm45777-201ENSMUST00000213009 301 ntBASIC5.53□□□□□ -1.52
Msx1P13297 AC130536.1-201ENSMUST00000224425 271 ntBASIC5.53□□□□□ -1.52
Msx1P13297 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.53□□□□□ -1.52
Msx1P13297 Gm23624-201ENSMUST00000082463 321 ntBASIC5.53□□□□□ -1.52
Msx1P13297 Gm24148-201ENSMUST00000082762 80 ntBASIC5.53□□□□□ -1.52
Msx1P13297 Gm26204-201ENSMUST00000082906 107 ntBASIC5.53□□□□□ -1.52
Msx1P13297 Gm23502-201ENSMUST00000083902 145 ntBASIC5.53□□□□□ -1.52
Msx1P13297 Gm25682-201ENSMUST00000083942 164 ntBASIC5.53□□□□□ -1.52
Msx1P13297 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Msx1P13297 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Msx1P13297 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Msx1P13297 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Msx1P13297 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.53□□□□□ -1.52
Msx1P13297 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Msx1P13297 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Msx1P13297 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Msx1P13297 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Msx1P13297 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Msx1P13297 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
Msx1P13297 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC5.52□□□□□ -1.53
Msx1P13297 Gm22592-201ENSMUST00000104242 131 ntBASIC5.52□□□□□ -1.53
Msx1P13297 Gm14657-201ENSMUST00000117461 302 ntBASIC5.52□□□□□ -1.53
Msx1P13297 Gm6897-201ENSMUST00000117714 138 ntBASIC5.52□□□□□ -1.53
Msx1P13297 Gm7927-201ENSMUST00000118818 880 ntBASIC5.52□□□□□ -1.53
Msx1P13297 Gm14758-201ENSMUST00000119104 138 ntBASIC5.52□□□□□ -1.53
Msx1P13297 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC5.52□□□□□ -1.53
Msx1P13297 Gm15037-201ENSMUST00000120358 259 ntBASIC5.52□□□□□ -1.53
Msx1P13297 Gm12494-201ENSMUST00000121684 521 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms