Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm37882-201ENSMUST00000195254 196 ntBASIC5.48□□□□□ -1.53
RaraP11416 Gm37817-201ENSMUST00000195276 434 ntBASIC5.48□□□□□ -1.53
RaraP11416 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC5.48□□□□□ -1.53
RaraP11416 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.48□□□□□ -1.53
RaraP11416 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.48□□□□□ -1.53
RaraP11416 CT030705.1-201ENSMUST00000223971 533 ntBASIC5.48□□□□□ -1.53
RaraP11416 AC154576.1-201ENSMUST00000225864 563 ntBASIC5.48□□□□□ -1.53
RaraP11416 AC158982.2-201ENSMUST00000226283 184 ntBASIC5.48□□□□□ -1.53
RaraP11416 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.48□□□□□ -1.53
RaraP11416 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RaraP11416 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RaraP11416 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RaraP11416 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RaraP11416 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RaraP11416 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.48□□□□□ -1.53
RaraP11416 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RaraP11416 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RaraP11416 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RaraP11416 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RaraP11416 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RaraP11416 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RaraP11416 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
RaraP11416 Gm33378-201ENSMUST00000219831 2758 ntBASIC5.47□□□□□ -1.53
RaraP11416 Gm15170-201ENSMUST00000121593 2023 ntBASIC5.47□□□□□ -1.53
RaraP11416 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.47□□□□□ -1.53
RaraP11416 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
RaraP11416 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
RaraP11416 Gm24429-201ENSMUST00000104076 132 ntBASIC5.47□□□□□ -1.53
RaraP11416 Snord72-201ENSMUST00000104549 81 ntBASIC5.47□□□□□ -1.53
RaraP11416 Gm13880-201ENSMUST00000118421 474 ntBASIC5.47□□□□□ -1.53
RaraP11416 Gm7312-201ENSMUST00000118798 469 ntBASIC5.47□□□□□ -1.53
RaraP11416 Gm14013-201ENSMUST00000119006 270 ntBASIC5.47□□□□□ -1.53
RaraP11416 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.47□□□□□ -1.53
RaraP11416 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RaraP11416 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RaraP11416 Gm25150-201ENSMUST00000157121 60 ntBASIC5.47□□□□□ -1.53
RaraP11416 Gm24240-201ENSMUST00000157785 135 ntBASIC5.47□□□□□ -1.53
RaraP11416 Gm25362-201ENSMUST00000158854 105 ntBASIC5.47□□□□□ -1.53
RaraP11416 Gm8292-201ENSMUST00000162574 396 ntBASIC5.47□□□□□ -1.53
RaraP11416 Gm24618-201ENSMUST00000177718 94 ntBASIC5.47□□□□□ -1.53
RaraP11416 Gm23953-201ENSMUST00000178214 94 ntBASIC5.47□□□□□ -1.53
RaraP11416 Gm26332-201ENSMUST00000179813 94 ntBASIC5.47□□□□□ -1.53
RaraP11416 Gm22863-201ENSMUST00000180265 94 ntBASIC5.47□□□□□ -1.53
RaraP11416 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5.47□□□□□ -1.53
RaraP11416 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RaraP11416 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.47□□□□□ -1.53
RaraP11416 Gm42542-201ENSMUST00000197978 268 ntBASIC5.47□□□□□ -1.53
RaraP11416 Gm42663-201ENSMUST00000199883 351 ntBASIC5.47□□□□□ -1.53
RaraP11416 Gm43393-201ENSMUST00000200147 194 ntBASIC5.47□□□□□ -1.53
RaraP11416 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC5.47□□□□□ -1.53
RaraP11416 CT572985.2-201ENSMUST00000220496 211 ntBASIC5.47□□□□□ -1.53
RaraP11416 Gm46369-201ENSMUST00000221577 401 ntBASIC5.47□□□□□ -1.53
RaraP11416 Gm6988-201ENSMUST00000222676 375 ntBASIC5.47□□□□□ -1.53
RaraP11416 Gm9202-201ENSMUST00000223036 437 ntBASIC5.47□□□□□ -1.53
RaraP11416 AC154305.1-201ENSMUST00000224443 450 ntBASIC5.47□□□□□ -1.53
RaraP11416 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.47□□□□□ -1.53
RaraP11416 AC123656.2-201ENSMUST00000226726 227 ntBASIC5.47□□□□□ -1.53
RaraP11416 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.47□□□□□ -1.53
RaraP11416 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RaraP11416 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RaraP11416 Gm26163-201ENSMUST00000083792 178 ntBASIC5.47□□□□□ -1.53
RaraP11416 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.47□□□□□ -1.53
RaraP11416 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC5.47□□□□□ -1.53
RaraP11416 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
RaraP11416 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.53
RaraP11416 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RaraP11416 Gm21379-201ENSMUST00000179772 1955 ntBASIC5.46□□□□□ -1.54
RaraP11416 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RaraP11416 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
RaraP11416 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.46□□□□□ -1.54
RaraP11416 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RaraP11416 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RaraP11416 Gm23910-201ENSMUST00000104597 132 ntBASIC5.46□□□□□ -1.54
RaraP11416 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.46□□□□□ -1.54
RaraP11416 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC5.46□□□□□ -1.54
RaraP11416 Gm15951-201ENSMUST00000118377 400 ntBASIC5.46□□□□□ -1.54
RaraP11416 Gm15211-201ENSMUST00000118932 528 ntBASIC5.46□□□□□ -1.54
RaraP11416 Gm11582-201ENSMUST00000121041 236 ntBASIC5.46□□□□□ -1.54
RaraP11416 Gm13511-201ENSMUST00000121167 363 ntBASIC5.46□□□□□ -1.54
RaraP11416 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.46□□□□□ -1.54
RaraP11416 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.46□□□□□ -1.54
RaraP11416 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.46□□□□□ -1.54
RaraP11416 Gm23993-201ENSMUST00000157478 144 ntBASIC5.46□□□□□ -1.54
RaraP11416 Gm25865-201ENSMUST00000158247 104 ntBASIC5.46□□□□□ -1.54
RaraP11416 Gm7953-201ENSMUST00000168278 469 ntBASIC5.46□□□□□ -1.54
RaraP11416 Gm20401-201ENSMUST00000173717 212 ntBASIC5.46□□□□□ -1.54
RaraP11416 Gm20657-201ENSMUST00000177079 515 ntBASIC5.46□□□□□ -1.54
RaraP11416 Gm24863-201ENSMUST00000179499 107 ntBASIC5.46□□□□□ -1.54
RaraP11416 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.46□□□□□ -1.54
RaraP11416 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.46□□□□□ -1.54
RaraP11416 Gm42694-201ENSMUST00000196951 358 ntBASIC5.46□□□□□ -1.54
RaraP11416 Gm42459-201ENSMUST00000199679 742 ntBASIC5.46□□□□□ -1.54
RaraP11416 Gm44419-201ENSMUST00000203338 229 ntBASIC5.46□□□□□ -1.54
RaraP11416 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RaraP11416 Gm22169-201ENSMUST00000083229 107 ntBASIC5.46□□□□□ -1.54
RaraP11416 Gm23451-201ENSMUST00000083328 122 ntBASIC5.46□□□□□ -1.54
RaraP11416 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
RaraP11416 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.46□□□□□ -1.54
RaraP11416 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RaraP11416 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms