Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm44354-201ENSMUST00000196017 143 ntBASIC3.85□□□□□ -1.79
Lire1P11260 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.85□□□□□ -1.79
Lire1P11260 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Lire1P11260 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC3.85□□□□□ -1.79
Lire1P11260 Gm44718-201ENSMUST00000206886 359 ntBASIC3.85□□□□□ -1.79
Lire1P11260 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.85□□□□□ -1.79
Lire1P11260 AC125539.1-202ENSMUST00000226449 670 ntBASIC3.85□□□□□ -1.79
Lire1P11260 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Lire1P11260 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Lire1P11260 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Lire1P11260 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Lire1P11260 n-R5s7-201ENSMUST00000083755 121 ntBASIC3.85□□□□□ -1.79
Lire1P11260 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Lire1P11260 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Lire1P11260 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Lire1P11260 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.85□□□□□ -1.79
Lire1P11260 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Lire1P11260 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Lire1P11260 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Lire1P11260 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Lire1P11260 AC153881.3-201ENSMUST00000218494 1561 ntBASIC3.85□□□□□ -1.79
Lire1P11260 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.85□□□□□ -1.79
Lire1P11260 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.84□□□□□ -1.79
Lire1P11260 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Lire1P11260 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Lire1P11260 Gm13046-201ENSMUST00000117391 501 ntBASIC3.84□□□□□ -1.79
Lire1P11260 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.84□□□□□ -1.79
Lire1P11260 Gm15553-201ENSMUST00000118757 430 ntBASIC3.84□□□□□ -1.79
Lire1P11260 Gm5943-201ENSMUST00000119458 459 ntBASIC3.84□□□□□ -1.79
Lire1P11260 Gm23886-201ENSMUST00000122684 313 ntBASIC3.84□□□□□ -1.79
Lire1P11260 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC3.84□□□□□ -1.79
Lire1P11260 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Lire1P11260 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Lire1P11260 Gm22501-201ENSMUST00000158981 127 ntBASIC3.84□□□□□ -1.79
Lire1P11260 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Lire1P11260 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.84□□□□□ -1.79
Lire1P11260 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Lire1P11260 Gm37501-201ENSMUST00000192830 691 ntBASIC3.84□□□□□ -1.79
Lire1P11260 Gm37629-201ENSMUST00000193635 1050 ntBASIC3.84□□□□□ -1.79
Lire1P11260 Gm9632-201ENSMUST00000195934 643 ntBASIC3.84□□□□□ -1.79
Lire1P11260 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.79
Lire1P11260 Gm42465-201ENSMUST00000197036 492 ntBASIC3.84□□□□□ -1.79
Lire1P11260 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Lire1P11260 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.84□□□□□ -1.79
Lire1P11260 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Lire1P11260 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC3.84□□□□□ -1.79
Lire1P11260 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Lire1P11260 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.84□□□□□ -1.79
Lire1P11260 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC3.84□□□□□ -1.79
Lire1P11260 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.84□□□□□ -1.79
Lire1P11260 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.84□□□□□ -1.79
Lire1P11260 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.84□□□□□ -1.79
Lire1P11260 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Lire1P11260 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Lire1P11260 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
Lire1P11260 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.84□□□□□ -1.79
Lire1P11260 Gm42852-201ENSMUST00000202649 1379 ntBASIC3.84□□□□□ -1.79
Lire1P11260 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Lire1P11260 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Lire1P11260 AC122357.2-201ENSMUST00000220732 1525 ntBASIC3.84□□□□□ -1.8
Lire1P11260 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
Lire1P11260 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
Lire1P11260 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC3.84□□□□□ -1.8
Lire1P11260 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.84□□□□□ -1.8
Lire1P11260 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.83□□□□□ -1.8
Lire1P11260 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Lire1P11260 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Lire1P11260 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.83□□□□□ -1.8
Lire1P11260 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Lire1P11260 Gm26075-201ENSMUST00000104062 121 ntBASIC3.83□□□□□ -1.8
Lire1P11260 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Lire1P11260 Gm15613-201ENSMUST00000118396 326 ntBASIC3.83□□□□□ -1.8
Lire1P11260 Gm22026-201ENSMUST00000122735 281 ntBASIC3.83□□□□□ -1.8
Lire1P11260 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.83□□□□□ -1.8
Lire1P11260 Gm25058-201ENSMUST00000157365 128 ntBASIC3.83□□□□□ -1.8
Lire1P11260 Ear-ps3-201ENSMUST00000168308 445 ntBASIC3.83□□□□□ -1.8
Lire1P11260 Mir713-201ENSMUST00000178651 108 ntBASIC3.83□□□□□ -1.8
Lire1P11260 Mir6537-201ENSMUST00000184150 110 ntBASIC3.83□□□□□ -1.8
Lire1P11260 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC3.83□□□□□ -1.8
Lire1P11260 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Lire1P11260 Gm29389-201ENSMUST00000191562 352 ntBASIC3.83□□□□□ -1.8
Lire1P11260 Gm38088-201ENSMUST00000195829 241 ntBASIC3.83□□□□□ -1.8
Lire1P11260 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Lire1P11260 Gm8820-201ENSMUST00000204077 571 ntBASIC3.83□□□□□ -1.8
Lire1P11260 Gm44720-201ENSMUST00000206076 260 ntBASIC3.83□□□□□ -1.8
Lire1P11260 Gm44634-201ENSMUST00000206119 152 ntBASIC3.83□□□□□ -1.8
Lire1P11260 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Lire1P11260 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Lire1P11260 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Lire1P11260 AC167202.1-201ENSMUST00000219027 331 ntBASIC3.83□□□□□ -1.8
Lire1P11260 Gm5655-201ENSMUST00000221078 901 ntBASIC3.83□□□□□ -1.8
Lire1P11260 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC3.83□□□□□ -1.8
Lire1P11260 CT025525.1-201ENSMUST00000226325 1054 ntBASIC3.83□□□□□ -1.8
Lire1P11260 AC154738.2-201ENSMUST00000227403 1110 ntBASIC3.83□□□□□ -1.8
Lire1P11260 AC155314.1-201ENSMUST00000227624 508 ntBASIC3.83□□□□□ -1.8
Lire1P11260 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Lire1P11260 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Lire1P11260 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Lire1P11260 Gm22043-201ENSMUST00000082993 158 ntBASIC3.83□□□□□ -1.8
Lire1P11260 Gm7171-201ENSMUST00000177413 1349 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 106.2 ms