Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.48□□□□□ -1.85
TnfP06804 Gm5527-201ENSMUST00000179821 642 ntBASIC3.48□□□□□ -1.85
TnfP06804 Gm26915-201ENSMUST00000183080 748 ntBASIC3.48□□□□□ -1.85
TnfP06804 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TnfP06804 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TnfP06804 Gm9931-201ENSMUST00000193584 1185 ntBASIC3.48□□□□□ -1.85
TnfP06804 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.48□□□□□ -1.85
TnfP06804 Gm7726-201ENSMUST00000206241 231 ntBASIC3.48□□□□□ -1.85
TnfP06804 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC3.48□□□□□ -1.85
TnfP06804 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC3.48□□□□□ -1.85
TnfP06804 AC170086.1-201ENSMUST00000225190 497 ntBASIC3.48□□□□□ -1.85
TnfP06804 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TnfP06804 Gm22444-201ENSMUST00000093693 108 ntBASIC3.48□□□□□ -1.85
TnfP06804 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
TnfP06804 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TnfP06804 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
TnfP06804 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TnfP06804 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
TnfP06804 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.47□□□□□ -1.85
TnfP06804 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TnfP06804 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
TnfP06804 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TnfP06804 Gm15161-201ENSMUST00000117340 387 ntBASIC3.47□□□□□ -1.85
TnfP06804 Gm12358-201ENSMUST00000121842 520 ntBASIC3.47□□□□□ -1.85
TnfP06804 Gm29104-201ENSMUST00000186304 222 ntBASIC3.47□□□□□ -1.85
TnfP06804 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC3.47□□□□□ -1.85
TnfP06804 Gm18900-201ENSMUST00000193218 584 ntBASIC3.47□□□□□ -1.85
TnfP06804 Gm18540-201ENSMUST00000204025 526 ntBASIC3.47□□□□□ -1.85
TnfP06804 Gm44594-201ENSMUST00000208982 407 ntBASIC3.47□□□□□ -1.85
TnfP06804 Gm18585-201ENSMUST00000215197 556 ntBASIC3.47□□□□□ -1.85
TnfP06804 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
TnfP06804 Gm4052-201ENSMUST00000220890 451 ntBASIC3.47□□□□□ -1.85
TnfP06804 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.47□□□□□ -1.85
TnfP06804 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
TnfP06804 Gm26129-201ENSMUST00000082719 107 ntBASIC3.47□□□□□ -1.85
TnfP06804 Gm25581-201ENSMUST00000083410 164 ntBASIC3.47□□□□□ -1.85
TnfP06804 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.47□□□□□ -1.85
TnfP06804 Gm22864-201ENSMUST00000083950 130 ntBASIC3.47□□□□□ -1.85
TnfP06804 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
TnfP06804 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
TnfP06804 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.46□□□□□ -1.86
TnfP06804 Gm12982-201ENSMUST00000117408 190 ntBASIC3.46□□□□□ -1.86
TnfP06804 Gm9432-201ENSMUST00000117810 759 ntBASIC3.46□□□□□ -1.86
TnfP06804 Gm11708-201ENSMUST00000119530 832 ntBASIC3.46□□□□□ -1.86
TnfP06804 Gm3835-201ENSMUST00000120752 403 ntBASIC3.46□□□□□ -1.86
TnfP06804 Gm15190-201ENSMUST00000120855 276 ntBASIC3.46□□□□□ -1.86
TnfP06804 Gm14101-201ENSMUST00000121502 473 ntBASIC3.46□□□□□ -1.86
TnfP06804 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TnfP06804 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
TnfP06804 Gm7094-201ENSMUST00000178379 366 ntBASIC3.46□□□□□ -1.86
TnfP06804 Gm27535-201ENSMUST00000183814 157 ntBASIC3.46□□□□□ -1.86
TnfP06804 Gm5552-201ENSMUST00000197149 515 ntBASIC3.46□□□□□ -1.86
TnfP06804 Gm19418-201ENSMUST00000197436 580 ntBASIC3.46□□□□□ -1.86
TnfP06804 Gm42850-201ENSMUST00000202094 201 ntBASIC3.46□□□□□ -1.86
TnfP06804 Gm43899-201ENSMUST00000203675 246 ntBASIC3.46□□□□□ -1.86
TnfP06804 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC3.46□□□□□ -1.86
TnfP06804 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.46□□□□□ -1.86
TnfP06804 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TnfP06804 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.46□□□□□ -1.86
TnfP06804 AC154467.1-201ENSMUST00000227527 449 ntBASIC3.46□□□□□ -1.86
TnfP06804 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
TnfP06804 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TnfP06804 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TnfP06804 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
TnfP06804 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
TnfP06804 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
TnfP06804 Gm6215-201ENSMUST00000119297 1386 ntBASIC3.46□□□□□ -1.86
TnfP06804 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.46□□□□□ -1.86
TnfP06804 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
TnfP06804 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.45□□□□□ -1.86
TnfP06804 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
TnfP06804 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.45□□□□□ -1.86
TnfP06804 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
TnfP06804 Gm24119-201ENSMUST00000103979 246 ntBASIC3.45□□□□□ -1.86
TnfP06804 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
TnfP06804 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TnfP06804 Gm13064-201ENSMUST00000119125 557 ntBASIC3.45□□□□□ -1.86
TnfP06804 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TnfP06804 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.45□□□□□ -1.86
TnfP06804 Gm11387-201ENSMUST00000120266 772 ntBASIC3.45□□□□□ -1.86
TnfP06804 Gm12105-201ENSMUST00000120846 779 ntBASIC3.45□□□□□ -1.86
TnfP06804 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
TnfP06804 Gm3851-201ENSMUST00000168653 318 ntBASIC3.45□□□□□ -1.86
TnfP06804 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
TnfP06804 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.45□□□□□ -1.86
TnfP06804 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
TnfP06804 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
TnfP06804 Gm22108-201ENSMUST00000177961 106 ntBASIC3.45□□□□□ -1.86
TnfP06804 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
TnfP06804 Gm21809-201ENSMUST00000178495 468 ntBASIC3.45□□□□□ -1.86
TnfP06804 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
TnfP06804 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
TnfP06804 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
TnfP06804 Gm2092-201ENSMUST00000178887 639 ntBASIC3.45□□□□□ -1.86
TnfP06804 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
TnfP06804 Gm17412-201ENSMUST00000179261 468 ntBASIC3.45□□□□□ -1.86
TnfP06804 Gm24798-201ENSMUST00000179334 106 ntBASIC3.45□□□□□ -1.86
TnfP06804 Gm23860-201ENSMUST00000179446 132 ntBASIC3.45□□□□□ -1.86
TnfP06804 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
TnfP06804 Gm2759-201ENSMUST00000179938 639 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms