Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Best1O88870 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
Best1O88870 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.55□□□□□ -1.68
Best1O88870 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Best1O88870 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC4.55□□□□□ -1.68
Best1O88870 Gm22498-201ENSMUST00000104497 86 ntBASIC4.55□□□□□ -1.68
Best1O88870 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Best1O88870 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Best1O88870 Gm13491-201ENSMUST00000118267 235 ntBASIC4.55□□□□□ -1.68
Best1O88870 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.55□□□□□ -1.68
Best1O88870 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.55□□□□□ -1.68
Best1O88870 Gm13687-201ENSMUST00000119857 282 ntBASIC4.55□□□□□ -1.68
Best1O88870 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.55□□□□□ -1.68
Best1O88870 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC4.55□□□□□ -1.68
Best1O88870 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Best1O88870 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC4.55□□□□□ -1.68
Best1O88870 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC4.55□□□□□ -1.68
Best1O88870 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC4.55□□□□□ -1.68
Best1O88870 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC4.55□□□□□ -1.68
Best1O88870 Gm26085-201ENSMUST00000157900 116 ntBASIC4.55□□□□□ -1.68
Best1O88870 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC4.55□□□□□ -1.68
Best1O88870 Gm22584-201ENSMUST00000177935 92 ntBASIC4.55□□□□□ -1.68
Best1O88870 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Best1O88870 Gm28660-201ENSMUST00000186496 253 ntBASIC4.55□□□□□ -1.68
Best1O88870 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Best1O88870 Gm21735-201ENSMUST00000190360 696 ntBASIC4.55□□□□□ -1.68
Best1O88870 Gm37123-201ENSMUST00000192994 1171 ntBASIC4.55□□□□□ -1.68
Best1O88870 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Best1O88870 Gm2522-201ENSMUST00000204280 322 ntBASIC4.55□□□□□ -1.68
Best1O88870 Gm18423-201ENSMUST00000205144 1074 ntBASIC4.55□□□□□ -1.68
Best1O88870 Gm44521-201ENSMUST00000206469 217 ntBASIC4.55□□□□□ -1.68
Best1O88870 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.55□□□□□ -1.68
Best1O88870 AC153506.2-201ENSMUST00000218051 257 ntBASIC4.55□□□□□ -1.68
Best1O88870 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC4.55□□□□□ -1.68
Best1O88870 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Best1O88870 AC112972.1-201ENSMUST00000227329 365 ntBASIC4.55□□□□□ -1.68
Best1O88870 Snord59a-201ENSMUST00000082844 74 ntBASIC4.55□□□□□ -1.68
Best1O88870 Gm25818-201ENSMUST00000083282 164 ntBASIC4.55□□□□□ -1.68
Best1O88870 Gm6177-201ENSMUST00000085589 465 ntBASIC4.55□□□□□ -1.68
Best1O88870 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Best1O88870 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Best1O88870 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Best1O88870 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Best1O88870 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Best1O88870 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.55□□□□□ -1.68
Best1O88870 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Best1O88870 Gm44679-201ENSMUST00000207202 2908 ntBASIC4.55□□□□□ -1.68
Best1O88870 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Best1O88870 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Best1O88870 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Best1O88870 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Best1O88870 Gm7905-201ENSMUST00000119933 1386 ntBASIC4.54□□□□□ -1.68
Best1O88870 Gm6207-201ENSMUST00000120075 1386 ntBASIC4.54□□□□□ -1.68
Best1O88870 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Best1O88870 Gm6228-201ENSMUST00000178856 1386 ntBASIC4.54□□□□□ -1.68
Best1O88870 Gm6221-201ENSMUST00000180064 1386 ntBASIC4.54□□□□□ -1.68
Best1O88870 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Best1O88870 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Best1O88870 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Best1O88870 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC4.54□□□□□ -1.68
Best1O88870 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
Best1O88870 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.54□□□□□ -1.68
Best1O88870 Gm15333-201ENSMUST00000118825 364 ntBASIC4.54□□□□□ -1.68
Best1O88870 Gm14785-201ENSMUST00000120185 539 ntBASIC4.54□□□□□ -1.68
Best1O88870 Gm23206-201ENSMUST00000122720 184 ntBASIC4.54□□□□□ -1.68
Best1O88870 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Best1O88870 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.54□□□□□ -1.68
Best1O88870 Gm24507-201ENSMUST00000157683 134 ntBASIC4.54□□□□□ -1.68
Best1O88870 Gm24689-201ENSMUST00000157760 104 ntBASIC4.54□□□□□ -1.68
Best1O88870 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Best1O88870 Gm24315-201ENSMUST00000177835 127 ntBASIC4.54□□□□□ -1.68
Best1O88870 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.54□□□□□ -1.68
Best1O88870 Gm4842-201ENSMUST00000183237 835 ntBASIC4.54□□□□□ -1.68
Best1O88870 Gm3145-201ENSMUST00000188584 220 ntBASIC4.54□□□□□ -1.68
Best1O88870 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC4.54□□□□□ -1.68
Best1O88870 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.54□□□□□ -1.68
Best1O88870 Gm42694-201ENSMUST00000196951 358 ntBASIC4.54□□□□□ -1.68
Best1O88870 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC4.54□□□□□ -1.68
Best1O88870 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC4.54□□□□□ -1.68
Best1O88870 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.54□□□□□ -1.68
Best1O88870 Gm5175-202ENSMUST00000219699 529 ntBASIC4.54□□□□□ -1.68
Best1O88870 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Best1O88870 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Best1O88870 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Best1O88870 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.54□□□□□ -1.68
Best1O88870 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Best1O88870 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
Best1O88870 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Best1O88870 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
Best1O88870 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Best1O88870 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Best1O88870 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Best1O88870 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Best1O88870 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Best1O88870 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Best1O88870 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Best1O88870 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.53□□□□□ -1.68
Best1O88870 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Best1O88870 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Best1O88870 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms