Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm10088-201ENSMUST00000074116 423 ntBASIC2.53□□□□□ -2
Hmgb3O54879 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC2.53□□□□□ -2
Hmgb3O54879 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgb3O54879 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.53□□□□□ -2
Hmgb3O54879 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Hmgb3O54879 AC137842.3-201ENSMUST00000228855 2397 ntBASIC2.52□□□□□ -2.01
Hmgb3O54879 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Hmgb3O54879 Gm3089-201ENSMUST00000200804 1395 ntBASIC2.52□□□□□ -2.01
Hmgb3O54879 Gm3302-201ENSMUST00000201462 1395 ntBASIC2.52□□□□□ -2.01
Hmgb3O54879 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Hmgb3O54879 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Hmgb3O54879 Gm15018-201ENSMUST00000117090 633 ntBASIC2.52□□□□□ -2.01
Hmgb3O54879 Gm4910-201ENSMUST00000119605 366 ntBASIC2.52□□□□□ -2.01
Hmgb3O54879 Gm13273-201ENSMUST00000119737 159 ntBASIC2.52□□□□□ -2.01
Hmgb3O54879 Gm14581-201ENSMUST00000121726 198 ntBASIC2.52□□□□□ -2.01
Hmgb3O54879 Gm25105-201ENSMUST00000122477 130 ntBASIC2.52□□□□□ -2.01
Hmgb3O54879 Gm22204-201ENSMUST00000122654 327 ntBASIC2.52□□□□□ -2.01
Hmgb3O54879 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC2.52□□□□□ -2.01
Hmgb3O54879 Gm24720-201ENSMUST00000157518 166 ntBASIC2.52□□□□□ -2.01
Hmgb3O54879 Gm16300-201ENSMUST00000160031 1279 ntBASIC2.52□□□□□ -2.01
Hmgb3O54879 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC2.52□□□□□ -2.01
Hmgb3O54879 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Hmgb3O54879 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Hmgb3O54879 Gm28534-201ENSMUST00000187744 676 ntBASIC2.52□□□□□ -2.01
Hmgb3O54879 Gm28923-201ENSMUST00000187755 322 ntBASIC2.52□□□□□ -2.01
Hmgb3O54879 Igkv2-113-201ENSMUST00000196138 362 ntBASIC2.52□□□□□ -2.01
Hmgb3O54879 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.52□□□□□ -2.01
Hmgb3O54879 Gm18327-201ENSMUST00000202426 830 ntBASIC2.52□□□□□ -2.01
Hmgb3O54879 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC2.52□□□□□ -2.01
Hmgb3O54879 Gm45380-201ENSMUST00000210465 315 ntBASIC2.52□□□□□ -2.01
Hmgb3O54879 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC2.52□□□□□ -2.01
Hmgb3O54879 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC2.52□□□□□ -2.01
Hmgb3O54879 AC155929.1-201ENSMUST00000220217 1276 ntBASIC2.52□□□□□ -2.01
Hmgb3O54879 Gm19563-201ENSMUST00000222031 270 ntBASIC2.52□□□□□ -2.01
Hmgb3O54879 AC239878.1-201ENSMUST00000224212 506 ntBASIC2.52□□□□□ -2.01
Hmgb3O54879 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Hmgb3O54879 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Hmgb3O54879 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Hmgb3O54879 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Hmgb3O54879 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Hmgb3O54879 Mir134-201ENSMUST00000083492 71 ntBASIC2.52□□□□□ -2.01
Hmgb3O54879 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Hmgb3O54879 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Hmgb3O54879 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Hmgb3O54879 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
Hmgb3O54879 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Hmgb3O54879 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Hmgb3O54879 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Hmgb3O54879 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Hmgb3O54879 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
Hmgb3O54879 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Hmgb3O54879 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Hmgb3O54879 Gm24831-201ENSMUST00000116778 126 ntBASIC2.51□□□□□ -2.01
Hmgb3O54879 Gm11905-201ENSMUST00000117653 678 ntBASIC2.51□□□□□ -2.01
Hmgb3O54879 Gm12213-201ENSMUST00000119924 353 ntBASIC2.51□□□□□ -2.01
Hmgb3O54879 Gm24936-201ENSMUST00000122598 247 ntBASIC2.51□□□□□ -2.01
Hmgb3O54879 Gm17075-201ENSMUST00000171924 670 ntBASIC2.51□□□□□ -2.01
Hmgb3O54879 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.51□□□□□ -2.01
Hmgb3O54879 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Hmgb3O54879 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Hmgb3O54879 Gm38329-201ENSMUST00000193473 427 ntBASIC2.51□□□□□ -2.01
Hmgb3O54879 Gm37417-201ENSMUST00000195257 454 ntBASIC2.51□□□□□ -2.01
Hmgb3O54879 Mir129b-201ENSMUST00000197461 65 ntBASIC2.51□□□□□ -2.01
Hmgb3O54879 Gm42621-201ENSMUST00000198114 275 ntBASIC2.51□□□□□ -2.01
Hmgb3O54879 Gm9655-201ENSMUST00000211321 1284 ntBASIC2.51□□□□□ -2.01
Hmgb3O54879 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC2.51□□□□□ -2.01
Hmgb3O54879 Gm5176-202ENSMUST00000220267 583 ntBASIC2.51□□□□□ -2.01
Hmgb3O54879 Gm4036-201ENSMUST00000220842 626 ntBASIC2.51□□□□□ -2.01
Hmgb3O54879 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.51□□□□□ -2.01
Hmgb3O54879 Gm8231-201ENSMUST00000221617 783 ntBASIC2.51□□□□□ -2.01
Hmgb3O54879 AC154358.1-201ENSMUST00000224871 218 ntBASIC2.51□□□□□ -2.01
Hmgb3O54879 AC121898.1-201ENSMUST00000227599 288 ntBASIC2.51□□□□□ -2.01
Hmgb3O54879 AC140209.1-201ENSMUST00000227875 284 ntBASIC2.51□□□□□ -2.01
Hmgb3O54879 Gm10042-201ENSMUST00000079884 78 ntBASIC2.51□□□□□ -2.01
Hmgb3O54879 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Hmgb3O54879 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Hmgb3O54879 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.51□□□□□ -2.01
Hmgb3O54879 Gm6215-201ENSMUST00000119297 1386 ntBASIC2.5□□□□□ -2.01
Hmgb3O54879 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Hmgb3O54879 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC2.5□□□□□ -2.01
Hmgb3O54879 Mir690-201ENSMUST00000102110 109 ntBASIC2.5□□□□□ -2.01
Hmgb3O54879 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Hmgb3O54879 Gm13761-201ENSMUST00000117238 807 ntBASIC2.5□□□□□ -2.01
Hmgb3O54879 Gm11577-201ENSMUST00000118030 737 ntBASIC2.5□□□□□ -2.01
Hmgb3O54879 Gm14681-201ENSMUST00000118047 411 ntBASIC2.5□□□□□ -2.01
Hmgb3O54879 Gm12691-201ENSMUST00000120186 456 ntBASIC2.5□□□□□ -2.01
Hmgb3O54879 Gm15480-201ENSMUST00000120442 519 ntBASIC2.5□□□□□ -2.01
Hmgb3O54879 Gm11414-201ENSMUST00000121795 263 ntBASIC2.5□□□□□ -2.01
Hmgb3O54879 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC2.5□□□□□ -2.01
Hmgb3O54879 Gm26277-201ENSMUST00000157097 152 ntBASIC2.5□□□□□ -2.01
Hmgb3O54879 Gm23168-201ENSMUST00000157156 143 ntBASIC2.5□□□□□ -2.01
Hmgb3O54879 Gm22521-201ENSMUST00000158272 134 ntBASIC2.5□□□□□ -2.01
Hmgb3O54879 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Hmgb3O54879 Gm20773-201ENSMUST00000178940 681 ntBASIC2.5□□□□□ -2.01
Hmgb3O54879 Gm23816-201ENSMUST00000179617 132 ntBASIC2.5□□□□□ -2.01
Hmgb3O54879 Gm27477-201ENSMUST00000184649 143 ntBASIC2.5□□□□□ -2.01
Hmgb3O54879 Gm42796-201ENSMUST00000199913 1087 ntBASIC2.5□□□□□ -2.01
Hmgb3O54879 Gm43039-201ENSMUST00000202883 963 ntBASIC2.5□□□□□ -2.01
Hmgb3O54879 Gm44611-201ENSMUST00000207507 355 ntBASIC2.5□□□□□ -2.01
Hmgb3O54879 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms