Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Pcdh9F8VPK8 Gm29218-205ENSMUST00000190846 615 ntBASIC4.07□□□□□ -1.76
Pcdh9F8VPK8 Gm28978-201ENSMUST00000191120 615 ntBASIC4.07□□□□□ -1.76
Pcdh9F8VPK8 Gm28927-201ENSMUST00000191528 272 ntBASIC4.07□□□□□ -1.76
Pcdh9F8VPK8 Gm37727-201ENSMUST00000191637 819 ntBASIC4.07□□□□□ -1.76
Pcdh9F8VPK8 Gm37172-201ENSMUST00000191926 615 ntBASIC4.07□□□□□ -1.76
Pcdh9F8VPK8 Gm20203-201ENSMUST00000192352 332 ntBASIC4.07□□□□□ -1.76
Pcdh9F8VPK8 Gm38270-201ENSMUST00000192721 407 ntBASIC4.07□□□□□ -1.76
Pcdh9F8VPK8 Gm37550-201ENSMUST00000193230 463 ntBASIC4.07□□□□□ -1.76
Pcdh9F8VPK8 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC4.07□□□□□ -1.76
Pcdh9F8VPK8 Gm43556-201ENSMUST00000196186 681 ntBASIC4.07□□□□□ -1.76
Pcdh9F8VPK8 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC4.07□□□□□ -1.76
Pcdh9F8VPK8 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Pcdh9F8VPK8 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Pcdh9F8VPK8 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Pcdh9F8VPK8 Gm23516-201ENSMUST00000093728 107 ntBASIC4.07□□□□□ -1.76
Pcdh9F8VPK8 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Pcdh9F8VPK8 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Pcdh9F8VPK8 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
Pcdh9F8VPK8 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Pcdh9F8VPK8 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Pcdh9F8VPK8 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Pcdh9F8VPK8 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm24430-201ENSMUST00000104077 104 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm23319-201ENSMUST00000104467 131 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm15951-201ENSMUST00000118377 400 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm7429-201ENSMUST00000118664 348 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm13831-201ENSMUST00000118764 302 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm15377-201ENSMUST00000119594 246 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm14848-201ENSMUST00000121850 467 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm13852-201ENSMUST00000122350 242 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm22960-201ENSMUST00000122517 104 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm25177-201ENSMUST00000122634 117 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm25965-201ENSMUST00000157170 93 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm22637-201ENSMUST00000158144 283 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm25520-201ENSMUST00000158389 118 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm23352-201ENSMUST00000158428 64 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm4222-201ENSMUST00000165784 470 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm22398-201ENSMUST00000174941 125 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm25731-201ENSMUST00000175167 125 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm5974-201ENSMUST00000181607 986 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm28655-201ENSMUST00000191538 692 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm37828-201ENSMUST00000192496 432 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm38261-201ENSMUST00000192608 316 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm17780-201ENSMUST00000207142 612 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm45367-201ENSMUST00000210171 347 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm31931-201ENSMUST00000219666 222 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 AC124569.4-201ENSMUST00000223830 1220 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 AL662807.1-201ENSMUST00000224183 126 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 CT025157.1-201ENSMUST00000226241 292 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm25147-201ENSMUST00000083030 105 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm23455-201ENSMUST00000083331 100 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm24490-201ENSMUST00000083803 98 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm24446-201ENSMUST00000083982 156 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Pcdh9F8VPK8 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm336-201ENSMUST00000186376 1480 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 AC159188.2-201ENSMUST00000224103 1301 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm22771-201ENSMUST00000104449 91 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm11869-201ENSMUST00000118701 329 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm14901-201ENSMUST00000119001 283 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm14591-201ENSMUST00000120407 518 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm14982-201ENSMUST00000121102 442 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm11931-201ENSMUST00000121630 447 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 146.1 ms