Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm38008-201ENSMUST00000195333 518 ntBASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Gm18193-201ENSMUST00000210017 772 ntBASIC3.32□□□□□ -1.88
Scn3aA2ASI5 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Gm18921-201ENSMUST00000221798 366 ntBASIC3.32□□□□□ -1.88
Scn3aA2ASI5 AC154562.1-201ENSMUST00000226140 966 ntBASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Gm13687-201ENSMUST00000119857 282 ntBASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Gm25373-201ENSMUST00000158156 115 ntBASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Gm8224-201ENSMUST00000166178 497 ntBASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Gm38356-201ENSMUST00000194313 408 ntBASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Gm42665-201ENSMUST00000202100 586 ntBASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC3.32□□□□□ -1.88
Scn3aA2ASI5 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.32□□□□□ -1.88
Scn3aA2ASI5 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Scn3aA2ASI5 Gm15933-201ENSMUST00000117215 616 ntBASIC3.31□□□□□ -1.88
Scn3aA2ASI5 Gm14885-201ENSMUST00000117969 496 ntBASIC3.31□□□□□ -1.88
Scn3aA2ASI5 Gm16471-201ENSMUST00000121940 618 ntBASIC3.31□□□□□ -1.88
Scn3aA2ASI5 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.31□□□□□ -1.88
Scn3aA2ASI5 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.31□□□□□ -1.88
Scn3aA2ASI5 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC3.31□□□□□ -1.88
Scn3aA2ASI5 Gm3496-201ENSMUST00000188283 745 ntBASIC3.31□□□□□ -1.88
Scn3aA2ASI5 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.31□□□□□ -1.88
Scn3aA2ASI5 Gm5176-202ENSMUST00000220267 583 ntBASIC3.31□□□□□ -1.88
Scn3aA2ASI5 AC105407.3-201ENSMUST00000224161 648 ntBASIC3.31□□□□□ -1.88
Scn3aA2ASI5 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.31□□□□□ -1.88
Scn3aA2ASI5 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Scn3aA2ASI5 AC164597.2-201ENSMUST00000226738 603 ntBASIC3.31□□□□□ -1.88
Scn3aA2ASI5 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Scn3aA2ASI5 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Scn3aA2ASI5 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Scn3aA2ASI5 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Scn3aA2ASI5 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Scn3aA2ASI5 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Scn3aA2ASI5 Gm20612-201ENSMUST00000176318 236 ntBASIC3.31□□□□□ -1.88
Scn3aA2ASI5 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Scn3aA2ASI5 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Scn3aA2ASI5 Gm28628-201ENSMUST00000187006 264 ntBASIC3.31□□□□□ -1.88
Scn3aA2ASI5 Gm28629-201ENSMUST00000187309 263 ntBASIC3.31□□□□□ -1.88
Scn3aA2ASI5 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Scn3aA2ASI5 Gm28803-201ENSMUST00000190385 764 ntBASIC3.31□□□□□ -1.88
Scn3aA2ASI5 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC3.31□□□□□ -1.88
Scn3aA2ASI5 Gm43992-201ENSMUST00000204358 197 ntBASIC3.31□□□□□ -1.88
Scn3aA2ASI5 Gm20074-201ENSMUST00000208144 484 ntBASIC3.31□□□□□ -1.88
Scn3aA2ASI5 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Scn3aA2ASI5 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.31□□□□□ -1.88
Scn3aA2ASI5 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.31□□□□□ -1.88
Scn3aA2ASI5 Mir21a-201ENSMUST00000083521 92 ntBASIC3.31□□□□□ -1.88
Scn3aA2ASI5 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC3.3□□□□□ -1.88
Scn3aA2ASI5 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.3□□□□□ -1.88
Scn3aA2ASI5 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Scn3aA2ASI5 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Scn3aA2ASI5 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Scn3aA2ASI5 Gm16445-201ENSMUST00000120399 714 ntBASIC3.3□□□□□ -1.88
Scn3aA2ASI5 Gm14126-201ENSMUST00000122345 395 ntBASIC3.3□□□□□ -1.88
Scn3aA2ASI5 Gm26001-201ENSMUST00000157989 103 ntBASIC3.3□□□□□ -1.88
Scn3aA2ASI5 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.3□□□□□ -1.88
Scn3aA2ASI5 Gm37081-201ENSMUST00000192034 196 ntBASIC3.3□□□□□ -1.88
Scn3aA2ASI5 Gm32447-201ENSMUST00000194265 697 ntBASIC3.3□□□□□ -1.88
Scn3aA2ASI5 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.3□□□□□ -1.88
Scn3aA2ASI5 Gm45778-201ENSMUST00000211959 153 ntBASIC3.3□□□□□ -1.88
Scn3aA2ASI5 AC166830.1-201ENSMUST00000224201 533 ntBASIC3.3□□□□□ -1.88
Scn3aA2ASI5 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Scn3aA2ASI5 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Scn3aA2ASI5 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Scn3aA2ASI5 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Scn3aA2ASI5 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Scn3aA2ASI5 Gm14463-201ENSMUST00000121117 498 ntBASIC3.29□□□□□ -1.88
Scn3aA2ASI5 Gm27044-201ENSMUST00000183033 796 ntBASIC3.29□□□□□ -1.88
Scn3aA2ASI5 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Scn3aA2ASI5 Gm44403-201ENSMUST00000198554 129 ntBASIC3.29□□□□□ -1.88
Scn3aA2ASI5 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.29□□□□□ -1.88
Scn3aA2ASI5 Gm43232-201ENSMUST00000201346 364 ntBASIC3.29□□□□□ -1.88
Scn3aA2ASI5 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC3.29□□□□□ -1.88
Scn3aA2ASI5 LOC667541-201ENSMUST00000223408 278 ntBASIC3.29□□□□□ -1.88
Scn3aA2ASI5 Olfr844-201ENSMUST00000054106 930 ntBASIC3.29□□□□□ -1.88
Scn3aA2ASI5 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Scn3aA2ASI5 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Scn3aA2ASI5 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Scn3aA2ASI5 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scn3aA2ASI5 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Scn3aA2ASI5 Gm6565-201ENSMUST00000121217 438 ntBASIC3.29□□□□□ -1.88
Scn3aA2ASI5 Gm23213-201ENSMUST00000122715 313 ntBASIC3.29□□□□□ -1.88
Scn3aA2ASI5 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC3.29□□□□□ -1.88
Scn3aA2ASI5 Gm19039-201ENSMUST00000204363 575 ntBASIC3.29□□□□□ -1.88
Scn3aA2ASI5 Gm4928-201ENSMUST00000219622 850 ntBASIC3.29□□□□□ -1.88
Scn3aA2ASI5 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.29□□□□□ -1.88
Scn3aA2ASI5 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms