Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CtcflA2APF3 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CtcflA2APF3 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CtcflA2APF3 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CtcflA2APF3 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CtcflA2APF3 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CtcflA2APF3 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CtcflA2APF3 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 Gm24273-201ENSMUST00000102332 164 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CtcflA2APF3 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CtcflA2APF3 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 Gm12739-201ENSMUST00000119769 382 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 Gm14656-201ENSMUST00000120342 502 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 Gm11982-201ENSMUST00000121480 314 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CtcflA2APF3 Gm25341-201ENSMUST00000157461 268 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 Mir5127-201ENSMUST00000175295 71 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 Gm25598-201ENSMUST00000179031 107 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 Mir6405-201ENSMUST00000184584 124 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.13□□□□□ -1.91
CtcflA2APF3 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CtcflA2APF3 Gm37616-201ENSMUST00000193974 322 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 Gm43531-201ENSMUST00000200676 1114 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 Gm34091-201ENSMUST00000200875 604 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CtcflA2APF3 Gm44076-201ENSMUST00000203072 520 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 Gm44294-201ENSMUST00000205090 728 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 Gm18855-201ENSMUST00000206689 570 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.13□□□□□ -1.91
CtcflA2APF3 Gm45796-201ENSMUST00000212483 114 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.13□□□□□ -1.91
CtcflA2APF3 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 AC159472.1-201ENSMUST00000218178 463 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
CtcflA2APF3 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CtcflA2APF3 Gm9765-201ENSMUST00000043170 321 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
CtcflA2APF3 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
CtcflA2APF3 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
CtcflA2APF3 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CtcflA2APF3 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CtcflA2APF3 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CtcflA2APF3 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.13□□□□□ -1.91
CtcflA2APF3 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
CtcflA2APF3 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CtcflA2APF3 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CtcflA2APF3 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.12□□□□□ -1.91
CtcflA2APF3 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.12□□□□□ -1.91
CtcflA2APF3 Gm25169-201ENSMUST00000104190 129 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
CtcflA2APF3 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 Gm16383-201ENSMUST00000118122 232 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 Gm12213-201ENSMUST00000119924 353 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 Gm11582-201ENSMUST00000121041 236 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 Gm14383-201ENSMUST00000121637 386 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.12□□□□□ -1.91
CtcflA2APF3 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC3.12□□□□□ -1.91
CtcflA2APF3 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CtcflA2APF3 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.12□□□□□ -1.91
CtcflA2APF3 Gm23592-201ENSMUST00000157859 117 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 Gm24773-201ENSMUST00000158513 99 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 Gm16290-201ENSMUST00000161175 474 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 Gm8902-201ENSMUST00000174341 1096 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 Gm24417-201ENSMUST00000178123 79 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 Gm24653-201ENSMUST00000178541 79 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 Gm25934-201ENSMUST00000178642 79 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CtcflA2APF3 Gm26746-201ENSMUST00000181722 487 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 Gm43115-201ENSMUST00000196244 160 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
CtcflA2APF3 Gm43039-201ENSMUST00000202883 963 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 Gm44099-201ENSMUST00000203299 112 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CtcflA2APF3 AC139638.1-201ENSMUST00000218027 364 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 AC160970.1-201ENSMUST00000219311 475 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 AC154727.1-201ENSMUST00000226537 499 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CtcflA2APF3 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC3.12□□□□□ -1.91
CtcflA2APF3 Gm26176-201ENSMUST00000083795 105 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CtcflA2APF3 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CtcflA2APF3 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CtcflA2APF3 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CtcflA2APF3 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.12□□□□□ -1.91
CtcflA2APF3 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.11□□□□□ -1.91
CtcflA2APF3 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms