Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Gm38265-201ENSMUST00000193479 3766 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Gm45517-201ENSMUST00000209973 2468 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Gm44440-201ENSMUST00000203139 2373 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Gm12442-201ENSMUST00000118372 338 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Gm13677-201ENSMUST00000120739 595 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC6.35□□□□□ -1.39
Msh5Q9QUM7 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Gm25115-201ENSMUST00000157187 140 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Gm23954-201ENSMUST00000157213 353 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Gm24682-201ENSMUST00000158764 137 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Gm22116-201ENSMUST00000158791 141 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Gm16404-201ENSMUST00000177739 468 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Gm14598-201ENSMUST00000180109 468 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Gm14625-201ENSMUST00000180231 468 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Gm28627-201ENSMUST00000186141 453 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Gm37692-201ENSMUST00000192633 232 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Mir376a-201ENSMUST00000197584 68 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Igkv4-73-201ENSMUST00000199760 358 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 AC132615.1-201ENSMUST00000213873 255 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC6.35□□□□□ -1.39
Msh5Q9QUM7 CT025689.2-201ENSMUST00000224979 429 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Gm6436-201ENSMUST00000077163 451 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Gm26066-201ENSMUST00000083385 109 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Gm10205-201ENSMUST00000087431 234 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Msh5Q9QUM7 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Msh5Q9QUM7 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Msh5Q9QUM7 AC124516.3-201ENSMUST00000221302 3613 ntBASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Msh5Q9QUM7 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Gm43496-201ENSMUST00000201682 3001 ntBASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Msh5Q9QUM7 AC124579.1-201ENSMUST00000223468 2520 ntBASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Gm24989-201ENSMUST00000104461 88 ntBASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Gm15195-201ENSMUST00000118775 263 ntBASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Gm16354-201ENSMUST00000155376 150 ntBASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Gm23959-201ENSMUST00000157208 324 ntBASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Gm22217-201ENSMUST00000157556 313 ntBASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Gm22214-201ENSMUST00000157563 172 ntBASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Mir1967-201ENSMUST00000157789 82 ntBASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Gm25494-201ENSMUST00000158143 100 ntBASIC6.34□□□□□ -1.39
Msh5Q9QUM7 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Gm22070-201ENSMUST00000178475 107 ntBASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Msh5Q9QUM7 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Gm37966-201ENSMUST00000193122 326 ntBASIC6.34□□□□□ -1.39
Msh5Q9QUM7 AC160962.3-201ENSMUST00000225914 112 ntBASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Gm42955-201ENSMUST00000197355 3393 ntBASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Msh5Q9QUM7 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Msh5Q9QUM7 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Msh5Q9QUM7 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Msh5Q9QUM7 AC154354.1-201ENSMUST00000224585 2109 ntBASIC6.34□□□□□ -1.4
Msh5Q9QUM7 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.34□□□□□ -1.4
Msh5Q9QUM7 Gm37926-201ENSMUST00000191922 2424 ntBASIC6.34□□□□□ -1.4
Msh5Q9QUM7 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Msh5Q9QUM7 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms