Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Gm28976-201ENSMUST00000188070 144 ntBASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Gm44757-201ENSMUST00000206373 157 ntBASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Gm18268-201ENSMUST00000208445 943 ntBASIC3.21□□□□□ -1.9
Trem1Q9JKE2 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Gm8681-201ENSMUST00000219115 618 ntBASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Gm19563-201ENSMUST00000222031 270 ntBASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Gm23443-201ENSMUST00000082916 128 ntBASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Mir370-201ENSMUST00000083499 79 ntBASIC3.21□□□□□ -1.9
Trem1Q9JKE2 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trem1Q9JKE2 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.21□□□□□ -1.9
Trem1Q9JKE2 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm3940-201ENSMUST00000105087 432 ntBASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm15151-201ENSMUST00000117106 177 ntBASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm15399-201ENSMUST00000118055 724 ntBASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm15988-201ENSMUST00000118677 367 ntBASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Klra14-ps-201ENSMUST00000119532 802 ntBASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm13692-201ENSMUST00000120774 371 ntBASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Mup-ps12-201ENSMUST00000126217 549 ntBASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm26085-201ENSMUST00000157900 116 ntBASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm27828-201ENSMUST00000184108 119 ntBASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm29513-201ENSMUST00000185741 202 ntBASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm18800-202ENSMUST00000188688 1105 ntBASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm29598-201ENSMUST00000188996 588 ntBASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm19498-201ENSMUST00000191128 331 ntBASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm18547-201ENSMUST00000192439 811 ntBASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm43724-201ENSMUST00000197516 226 ntBASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.2□□□□□ -1.9
Trem1Q9JKE2 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.2□□□□□ -1.9
Trem1Q9JKE2 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Trem1Q9JKE2 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.2□□□□□ -1.9
Trem1Q9JKE2 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Mir30e-201ENSMUST00000083475 92 ntBASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm14910-201ENSMUST00000121037 1805 ntBASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm38278-201ENSMUST00000194715 1365 ntBASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.2□□□□□ -1.9
Trem1Q9JKE2 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trem1Q9JKE2 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Gm14677-201ENSMUST00000117866 486 ntBASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Gm2862-201ENSMUST00000161524 328 ntBASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Gm26866-201ENSMUST00000180414 802 ntBASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Gm4854-201ENSMUST00000185902 574 ntBASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Gm28623-201ENSMUST00000187219 192 ntBASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Gm20177-201ENSMUST00000203705 334 ntBASIC3.19□□□□□ -1.9
Trem1Q9JKE2 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Gm5655-201ENSMUST00000221078 901 ntBASIC3.19□□□□□ -1.9
Trem1Q9JKE2 AC159293.2-201ENSMUST00000222289 424 ntBASIC3.19□□□□□ -1.9
Trem1Q9JKE2 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.19□□□□□ -1.9
Trem1Q9JKE2 AC154452.1-201ENSMUST00000225819 241 ntBASIC3.19□□□□□ -1.9
Trem1Q9JKE2 AC133176.1-201ENSMUST00000226668 219 ntBASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Mir383-201ENSMUST00000083523 70 ntBASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Gm42479-201ENSMUST00000198654 1356 ntBASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms