Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC4.04□□□□□ -1.76
Cpsf1Q9EPU4 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC4.04□□□□□ -1.76
Cpsf1Q9EPU4 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC4.04□□□□□ -1.76
Cpsf1Q9EPU4 Snord93-201ENSMUST00000175580 71 ntBASIC4.04□□□□□ -1.76
Cpsf1Q9EPU4 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC4.04□□□□□ -1.76
Cpsf1Q9EPU4 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC4.04□□□□□ -1.76
Cpsf1Q9EPU4 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC4.04□□□□□ -1.76
Cpsf1Q9EPU4 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC4.04□□□□□ -1.76
Cpsf1Q9EPU4 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC4.04□□□□□ -1.76
Cpsf1Q9EPU4 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC4.04□□□□□ -1.76
Cpsf1Q9EPU4 Mir9-1-201ENSMUST00000199907 89 ntBASIC4.04□□□□□ -1.76
Cpsf1Q9EPU4 AC155839.1-201ENSMUST00000200105 147 ntBASIC4.04□□□□□ -1.76
Cpsf1Q9EPU4 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Cpsf1Q9EPU4 AC099578.1-201ENSMUST00000220147 435 ntBASIC4.04□□□□□ -1.76
Cpsf1Q9EPU4 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Cpsf1Q9EPU4 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.03□□□□□ -1.76
Cpsf1Q9EPU4 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
Cpsf1Q9EPU4 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Cpsf1Q9EPU4 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Cpsf1Q9EPU4 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Cpsf1Q9EPU4 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Cpsf1Q9EPU4 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
Cpsf1Q9EPU4 Gm24122-201ENSMUST00000104107 132 ntBASIC4.03□□□□□ -1.76
Cpsf1Q9EPU4 Gm14518-201ENSMUST00000117351 542 ntBASIC4.03□□□□□ -1.76
Cpsf1Q9EPU4 Gm14197-201ENSMUST00000117480 1049 ntBASIC4.03□□□□□ -1.76
Cpsf1Q9EPU4 Gm14890-201ENSMUST00000117660 676 ntBASIC4.03□□□□□ -1.76
Cpsf1Q9EPU4 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC4.03□□□□□ -1.76
Cpsf1Q9EPU4 Gm22908-201ENSMUST00000177620 110 ntBASIC4.03□□□□□ -1.76
Cpsf1Q9EPU4 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Cpsf1Q9EPU4 Gm1833-201ENSMUST00000191608 682 ntBASIC4.03□□□□□ -1.76
Cpsf1Q9EPU4 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC4.03□□□□□ -1.76
Cpsf1Q9EPU4 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Cpsf1Q9EPU4 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Cpsf1Q9EPU4 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Cpsf1Q9EPU4 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Cpsf1Q9EPU4 n-R5s40-201ENSMUST00000082475 124 ntBASIC4.03□□□□□ -1.76
Cpsf1Q9EPU4 Gm22423-201ENSMUST00000082861 184 ntBASIC4.03□□□□□ -1.76
Cpsf1Q9EPU4 n-R5s220-201ENSMUST00000082926 120 ntBASIC4.03□□□□□ -1.76
Cpsf1Q9EPU4 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC4.03□□□□□ -1.76
Cpsf1Q9EPU4 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.02□□□□□ -1.77
Cpsf1Q9EPU4 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC4.02□□□□□ -1.77
Cpsf1Q9EPU4 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC4.02□□□□□ -1.77
Cpsf1Q9EPU4 Gm21827-201ENSMUST00000178247 423 ntBASIC4.02□□□□□ -1.77
Cpsf1Q9EPU4 Gm25360-201ENSMUST00000178786 191 ntBASIC4.02□□□□□ -1.77
Cpsf1Q9EPU4 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC4.02□□□□□ -1.77
Cpsf1Q9EPU4 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC4.02□□□□□ -1.77
Cpsf1Q9EPU4 Gm42578-201ENSMUST00000199960 194 ntBASIC4.02□□□□□ -1.77
Cpsf1Q9EPU4 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC4.02□□□□□ -1.77
Cpsf1Q9EPU4 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Cpsf1Q9EPU4 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Cpsf1Q9EPU4 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Cpsf1Q9EPU4 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Cpsf1Q9EPU4 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Cpsf1Q9EPU4 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Cpsf1Q9EPU4 AC124561.2-201ENSMUST00000226657 1973 ntBASIC4.01□□□□□ -1.77
Cpsf1Q9EPU4 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC4.01□□□□□ -1.77
Cpsf1Q9EPU4 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC4.01□□□□□ -1.77
Cpsf1Q9EPU4 Gm24691-201ENSMUST00000157762 140 ntBASIC4.01□□□□□ -1.77
Cpsf1Q9EPU4 Gm24876-201ENSMUST00000158780 92 ntBASIC4.01□□□□□ -1.77
Cpsf1Q9EPU4 Gm17166-201ENSMUST00000172006 431 ntBASIC4.01□□□□□ -1.77
Cpsf1Q9EPU4 Mir3103-201ENSMUST00000175474 67 ntBASIC4.01□□□□□ -1.77
Cpsf1Q9EPU4 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC4.01□□□□□ -1.77
Cpsf1Q9EPU4 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC4.01□□□□□ -1.77
Cpsf1Q9EPU4 Gm43384-201ENSMUST00000200569 637 ntBASIC4.01□□□□□ -1.77
Cpsf1Q9EPU4 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Cpsf1Q9EPU4 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Cpsf1Q9EPU4 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Cpsf1Q9EPU4 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Cpsf1Q9EPU4 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC4□□□□□ -1.77
Cpsf1Q9EPU4 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Cpsf1Q9EPU4 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC4□□□□□ -1.77
Cpsf1Q9EPU4 Gm9119-201ENSMUST00000118866 495 ntBASIC4□□□□□ -1.77
Cpsf1Q9EPU4 Gm9078-201ENSMUST00000119126 617 ntBASIC4□□□□□ -1.77
Cpsf1Q9EPU4 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC4□□□□□ -1.77
Cpsf1Q9EPU4 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC4□□□□□ -1.77
Cpsf1Q9EPU4 Gm3370-201ENSMUST00000171785 500 ntBASIC4□□□□□ -1.77
Cpsf1Q9EPU4 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC4□□□□□ -1.77
Cpsf1Q9EPU4 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Cpsf1Q9EPU4 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC4□□□□□ -1.77
Cpsf1Q9EPU4 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC4□□□□□ -1.77
Cpsf1Q9EPU4 Gm45312-201ENSMUST00000210566 311 ntBASIC4□□□□□ -1.77
Cpsf1Q9EPU4 AC124549.2-201ENSMUST00000224243 222 ntBASIC4□□□□□ -1.77
Cpsf1Q9EPU4 AC154527.5-201ENSMUST00000224448 496 ntBASIC4□□□□□ -1.77
Cpsf1Q9EPU4 AC115291.1-201ENSMUST00000226803 258 ntBASIC4□□□□□ -1.77
Cpsf1Q9EPU4 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC4□□□□□ -1.77
Cpsf1Q9EPU4 Gm24446-201ENSMUST00000083982 156 ntBASIC4□□□□□ -1.77
Cpsf1Q9EPU4 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Cpsf1Q9EPU4 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Cpsf1Q9EPU4 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Cpsf1Q9EPU4 Gm22750-201ENSMUST00000102076 103 ntBASIC3.99□□□□□ -1.77
Cpsf1Q9EPU4 Gm23063-201ENSMUST00000102350 93 ntBASIC3.99□□□□□ -1.77
Cpsf1Q9EPU4 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Cpsf1Q9EPU4 Gm5754-201ENSMUST00000118774 892 ntBASIC3.99□□□□□ -1.77
Cpsf1Q9EPU4 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.99□□□□□ -1.77
Cpsf1Q9EPU4 Gm24443-201ENSMUST00000157242 132 ntBASIC3.99□□□□□ -1.77
Cpsf1Q9EPU4 Gm22849-201ENSMUST00000157713 307 ntBASIC3.99□□□□□ -1.77
Cpsf1Q9EPU4 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Cpsf1Q9EPU4 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.99□□□□□ -1.77
Cpsf1Q9EPU4 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.99□□□□□ -1.77
Cpsf1Q9EPU4 Gm43415-201ENSMUST00000201934 750 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms