Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Gm26367-201ENSMUST00000104165 132 ntBASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Gm13331-201ENSMUST00000117500 448 ntBASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Gm15175-201ENSMUST00000117629 132 ntBASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Gm12335-201ENSMUST00000119738 327 ntBASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Gm13406-201ENSMUST00000121991 256 ntBASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Gm23168-201ENSMUST00000157156 143 ntBASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Gm26402-201ENSMUST00000158499 113 ntBASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Gm22434-201ENSMUST00000158549 122 ntBASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Gm27599-201ENSMUST00000183758 174 ntBASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Gm28141-201ENSMUST00000186676 342 ntBASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Gm37111-201ENSMUST00000193250 634 ntBASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Gm2147-201ENSMUST00000193588 639 ntBASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Igkv2-105-201ENSMUST00000196931 377 ntBASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Gm7726-201ENSMUST00000206241 231 ntBASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Gm8745-201ENSMUST00000207846 782 ntBASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC5.49□□□□□ -1.53
Upf1Q9EPU0 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.49□□□□□ -1.53
Upf1Q9EPU0 AC239878.1-201ENSMUST00000224212 506 ntBASIC5.49□□□□□ -1.53
Upf1Q9EPU0 CT573085.1-201ENSMUST00000224279 1197 ntBASIC5.49□□□□□ -1.53
Upf1Q9EPU0 AC116656.1-201ENSMUST00000227040 755 ntBASIC5.49□□□□□ -1.53
Upf1Q9EPU0 CT025602.1-201ENSMUST00000227281 382 ntBASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Gm3867-201ENSMUST00000086108 279 ntBASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Upf1Q9EPU0 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Gm43891-201ENSMUST00000205132 3112 ntBASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Gm3972-201ENSMUST00000173960 2861 ntBASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Gm25727-201ENSMUST00000104522 131 ntBASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Gm12495-201ENSMUST00000119750 447 ntBASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Gm11679-201ENSMUST00000121830 779 ntBASIC5.48□□□□□ -1.53
Upf1Q9EPU0 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Gm25965-201ENSMUST00000157170 93 ntBASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Mir1946a-201ENSMUST00000158360 134 ntBASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Gm24503-201ENSMUST00000158454 135 ntBASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Gm25037-201ENSMUST00000175418 110 ntBASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Gm21638-201ENSMUST00000179473 836 ntBASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Gm8296-201ENSMUST00000185597 524 ntBASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Gm28724-201ENSMUST00000186149 625 ntBASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Gm5731-201ENSMUST00000190969 481 ntBASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Gm37404-201ENSMUST00000195726 359 ntBASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Gm43238-201ENSMUST00000196463 359 ntBASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Gm42579-201ENSMUST00000200512 734 ntBASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Gm18602-201ENSMUST00000209794 851 ntBASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Gm24268-201ENSMUST00000082990 110 ntBASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Upf1Q9EPU0 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Upf1Q9EPU0 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Upf1Q9EPU0 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Upf1Q9EPU0 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Upf1Q9EPU0 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
Upf1Q9EPU0 Gm26996-201ENSMUST00000204418 1359 ntBASIC5.47□□□□□ -1.53
Upf1Q9EPU0 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Upf1Q9EPU0 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.47□□□□□ -1.53
Upf1Q9EPU0 Snora64-201ENSMUST00000104521 134 ntBASIC5.47□□□□□ -1.53
Upf1Q9EPU0 Gm14670-201ENSMUST00000117327 337 ntBASIC5.47□□□□□ -1.53
Upf1Q9EPU0 Gm6797-201ENSMUST00000119440 512 ntBASIC5.47□□□□□ -1.53
Upf1Q9EPU0 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Upf1Q9EPU0 Gm23167-201ENSMUST00000157155 103 ntBASIC5.47□□□□□ -1.53
Upf1Q9EPU0 Gm23098-201ENSMUST00000157552 299 ntBASIC5.47□□□□□ -1.53
Upf1Q9EPU0 Gm16490-201ENSMUST00000165299 351 ntBASIC5.47□□□□□ -1.53
Upf1Q9EPU0 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.47□□□□□ -1.53
Upf1Q9EPU0 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Upf1Q9EPU0 Npn2-202ENSMUST00000189275 235 ntBASIC5.47□□□□□ -1.53
Upf1Q9EPU0 Gm29848-201ENSMUST00000203107 295 ntBASIC5.47□□□□□ -1.53
Upf1Q9EPU0 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC5.47□□□□□ -1.53
Upf1Q9EPU0 Gm3086-202ENSMUST00000221248 310 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms