Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Gm43975-201ENSMUST00000203023 481 ntBASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 AC158631.2-201ENSMUST00000219999 478 ntBASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 AC140210.1-201ENSMUST00000224961 534 ntBASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Gm4987-201ENSMUST00000078326 408 ntBASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Gm18594-201ENSMUST00000175733 1403 ntBASIC4.1□□□□□ -1.75
Ccdc39Q9D5Y1 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Gm22115-201ENSMUST00000103976 133 ntBASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Gm23923-201ENSMUST00000104108 133 ntBASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Gm26254-201ENSMUST00000122491 118 ntBASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Gm16101-201ENSMUST00000160695 430 ntBASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Gm17075-201ENSMUST00000171924 670 ntBASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Gm28030-201ENSMUST00000184987 138 ntBASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Gm28155-201ENSMUST00000191066 151 ntBASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Gm33973-201ENSMUST00000195148 534 ntBASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Gm44084-201ENSMUST00000203947 409 ntBASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 AC159472.1-201ENSMUST00000218178 463 ntBASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 AL662807.1-201ENSMUST00000224183 126 ntBASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 AC174797.3-202ENSMUST00000224578 587 ntBASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Gm22739-201ENSMUST00000083437 160 ntBASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Gm10780-201ENSMUST00000099459 285 ntBASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc39Q9D5Y1 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC4.09□□□□□ -1.76
Ccdc39Q9D5Y1 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.76
Ccdc39Q9D5Y1 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.09□□□□□ -1.76
Ccdc39Q9D5Y1 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.76
Ccdc39Q9D5Y1 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
Ccdc39Q9D5Y1 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 Gm24715-201ENSMUST00000102377 95 ntBASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 Gm24127-201ENSMUST00000104110 130 ntBASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 Gm15951-201ENSMUST00000118377 400 ntBASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 Gm22345-201ENSMUST00000122644 107 ntBASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 Gm18354-201ENSMUST00000173515 1068 ntBASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 Gm7094-201ENSMUST00000178379 366 ntBASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 Gm28314-201ENSMUST00000191276 345 ntBASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 Gm37303-201ENSMUST00000194202 1559 ntBASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 Gm42850-201ENSMUST00000202094 201 ntBASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 Gm7530-201ENSMUST00000218466 605 ntBASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 Platr25-208ENSMUST00000222602 939 ntBASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 AC154467.1-201ENSMUST00000227527 449 ntBASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 AC192088.2-201ENSMUST00000227590 411 ntBASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Ccdc39Q9D5Y1 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm14825-201ENSMUST00000113538 701 ntBASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm14622-201ENSMUST00000117117 468 ntBASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm13359-201ENSMUST00000119000 695 ntBASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm15103-201ENSMUST00000119893 871 ntBASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm15274-201ENSMUST00000131442 291 ntBASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm21979-201ENSMUST00000139887 291 ntBASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm15259-201ENSMUST00000151262 291 ntBASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm26045-201ENSMUST00000157862 97 ntBASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm24537-201ENSMUST00000157950 102 ntBASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm25438-201ENSMUST00000158281 110 ntBASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Ear-ps7-201ENSMUST00000161287 442 ntBASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm18604-201ENSMUST00000172535 558 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms