Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC4.1□□□□□ -1.75
Vps28Q9D1C8 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC4.1□□□□□ -1.75
Vps28Q9D1C8 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC4.1□□□□□ -1.75
Vps28Q9D1C8 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Vps28Q9D1C8 AC160016.1-201ENSMUST00000215589 448 ntBASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Gm8785-201ENSMUST00000220259 487 ntBASIC4.1□□□□□ -1.75
Vps28Q9D1C8 AC134254.5-201ENSMUST00000223436 400 ntBASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Vps28Q9D1C8 n-R5s196-201ENSMUST00000083136 117 ntBASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Vps28Q9D1C8 Gm37970-201ENSMUST00000193865 1732 ntBASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Gm11367-201ENSMUST00000117802 120 ntBASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Gm13607-201ENSMUST00000117875 539 ntBASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Gm13567-201ENSMUST00000118026 247 ntBASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Gm15854-201ENSMUST00000118879 808 ntBASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Gm12358-201ENSMUST00000121842 520 ntBASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Gm11281-201ENSMUST00000141391 576 ntBASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Gm22036-201ENSMUST00000157279 215 ntBASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Gm26187-201ENSMUST00000157693 101 ntBASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Ear-ps12-201ENSMUST00000161720 451 ntBASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Gm4222-201ENSMUST00000165784 470 ntBASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Mir1251-201ENSMUST00000175486 84 ntBASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Gm28267-201ENSMUST00000191093 265 ntBASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Gm29288-201ENSMUST00000191582 901 ntBASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC4.09□□□□□ -1.75
Vps28Q9D1C8 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Gm42828-201ENSMUST00000199669 469 ntBASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Gm43004-201ENSMUST00000201872 703 ntBASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Vps28Q9D1C8 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Gm18507-201ENSMUST00000218855 525 ntBASIC4.09□□□□□ -1.75
Vps28Q9D1C8 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC4.09□□□□□ -1.75
Vps28Q9D1C8 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.09□□□□□ -1.75
Vps28Q9D1C8 AC154727.1-201ENSMUST00000226537 499 ntBASIC4.09□□□□□ -1.75
Vps28Q9D1C8 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Vps28Q9D1C8 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
Vps28Q9D1C8 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
Vps28Q9D1C8 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
Vps28Q9D1C8 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.09□□□□□ -1.76
Vps28Q9D1C8 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.76
Vps28Q9D1C8 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Vps28Q9D1C8 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Vps28Q9D1C8 Gm24120-201ENSMUST00000103978 129 ntBASIC4.08□□□□□ -1.76
Vps28Q9D1C8 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Vps28Q9D1C8 Gm13268-201ENSMUST00000117485 433 ntBASIC4.08□□□□□ -1.76
Vps28Q9D1C8 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Vps28Q9D1C8 Gm26320-201ENSMUST00000157742 306 ntBASIC4.08□□□□□ -1.76
Vps28Q9D1C8 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
Vps28Q9D1C8 Gm6650-201ENSMUST00000166710 614 ntBASIC4.08□□□□□ -1.76
Vps28Q9D1C8 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Vps28Q9D1C8 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Vps28Q9D1C8 Gm4854-201ENSMUST00000185902 574 ntBASIC4.08□□□□□ -1.76
Vps28Q9D1C8 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Vps28Q9D1C8 Gm28500-201ENSMUST00000190286 151 ntBASIC4.08□□□□□ -1.76
Vps28Q9D1C8 Gm4855-201ENSMUST00000192270 1967 ntBASIC4.08□□□□□ -1.76
Vps28Q9D1C8 Gm20162-201ENSMUST00000193629 871 ntBASIC4.08□□□□□ -1.76
Vps28Q9D1C8 Gm17887-201ENSMUST00000200194 547 ntBASIC4.08□□□□□ -1.76
Vps28Q9D1C8 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Vps28Q9D1C8 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC4.08□□□□□ -1.76
Vps28Q9D1C8 Gm5653-201ENSMUST00000223393 1337 ntBASIC4.08□□□□□ -1.76
Vps28Q9D1C8 AC167669.3-201ENSMUST00000224720 393 ntBASIC4.08□□□□□ -1.76
Vps28Q9D1C8 AC125539.1-202ENSMUST00000226449 670 ntBASIC4.08□□□□□ -1.76
Vps28Q9D1C8 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Vps28Q9D1C8 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Vps28Q9D1C8 Snord14e-201ENSMUST00000082857 90 ntBASIC4.08□□□□□ -1.76
Vps28Q9D1C8 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Vps28Q9D1C8 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Vps28Q9D1C8 Gm43736-201ENSMUST00000196377 2281 ntBASIC4.07□□□□□ -1.76
Vps28Q9D1C8 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Gm42483-201ENSMUST00000197556 1742 ntBASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Gm4736-201ENSMUST00000100870 380 ntBASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Mir599-201ENSMUST00000102378 88 ntBASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Gm24318-201ENSMUST00000104490 131 ntBASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Gm15025-201ENSMUST00000118434 418 ntBASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Gm14627-201ENSMUST00000118931 567 ntBASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC4.07□□□□□ -1.76
Vps28Q9D1C8 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms