Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Gm45023-201ENSMUST00000207951 379 ntBASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Gm2628-201ENSMUST00000218019 426 ntBASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Gnrh1-202ENSMUST00000223929 428 ntBASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 AC118639.1-201ENSMUST00000227204 338 ntBASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ddx56Q9D0R4 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Gm43736-201ENSMUST00000196377 2281 ntBASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Gm23577-201ENSMUST00000103950 110 ntBASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Gm14428-201ENSMUST00000120408 822 ntBASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Gm13430-201ENSMUST00000121366 288 ntBASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Gm12685-201ENSMUST00000121702 214 ntBASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Gm13007-201ENSMUST00000121866 365 ntBASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Gm23702-201ENSMUST00000158840 130 ntBASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Gm16134-201ENSMUST00000161714 336 ntBASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Gm6214-201ENSMUST00000178845 541 ntBASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Gm21850-201ENSMUST00000179792 359 ntBASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Zfp-ps-201ENSMUST00000185025 478 ntBASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Gm28116-201ENSMUST00000189064 387 ntBASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Gm29950-201ENSMUST00000195273 237 ntBASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Gm43631-201ENSMUST00000202011 369 ntBASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Gm44879-201ENSMUST00000207007 503 ntBASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Gm3442-201ENSMUST00000216808 710 ntBASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 AC124569.4-201ENSMUST00000223830 1220 ntBASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 n-R5s37-201ENSMUST00000082533 118 ntBASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Mir19a-201ENSMUST00000083482 82 ntBASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Ddx56Q9D0R4 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm16089-201ENSMUST00000117679 336 ntBASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm11366-201ENSMUST00000119279 429 ntBASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm13406-201ENSMUST00000121991 256 ntBASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm22378-201ENSMUST00000157481 111 ntBASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm22841-201ENSMUST00000158443 62 ntBASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm16101-201ENSMUST00000160695 430 ntBASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm16545-201ENSMUST00000161968 463 ntBASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm5258-201ENSMUST00000165437 327 ntBASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm20397-201ENSMUST00000174520 362 ntBASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm4761-201ENSMUST00000178086 582 ntBASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm21241-201ENSMUST00000179551 934 ntBASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm5252-201ENSMUST00000189030 909 ntBASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm43224-201ENSMUST00000201567 898 ntBASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm44295-201ENSMUST00000203805 437 ntBASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm6929-201ENSMUST00000210930 468 ntBASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm17779-201ENSMUST00000213395 394 ntBASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 AC134334.1-201ENSMUST00000214277 255 ntBASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm46994-201ENSMUST00000221523 219 ntBASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm5955-201ENSMUST00000222712 219 ntBASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC4.77□□□□□ -1.65
Ddx56Q9D0R4 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms