Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm6501-201ENSMUST00000187178 916 ntBASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm29452-201ENSMUST00000187996 313 ntBASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm28860-201ENSMUST00000188103 313 ntBASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm28314-201ENSMUST00000191276 345 ntBASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm43476-201ENSMUST00000197873 405 ntBASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm19219-201ENSMUST00000215863 724 ntBASIC4.07□□□□□ -1.76
Smc1aQ9CU62 AC132465.3-201ENSMUST00000219326 195 ntBASIC4.07□□□□□ -1.76
Smc1aQ9CU62 AC133101.1-201ENSMUST00000226939 1199 ntBASIC4.07□□□□□ -1.76
Smc1aQ9CU62 AC134420.1-201ENSMUST00000227027 289 ntBASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Olfr844-201ENSMUST00000054106 930 ntBASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm8074-201ENSMUST00000095071 252 ntBASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm42967-201ENSMUST00000198647 2312 ntBASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smc1aQ9CU62 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Gm45577-201ENSMUST00000210206 2287 ntBASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Gm24061-201ENSMUST00000157489 120 ntBASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Gm24976-201ENSMUST00000158972 135 ntBASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Gm17204-201ENSMUST00000167936 478 ntBASIC4.06□□□□□ -1.76
Smc1aQ9CU62 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
Smc1aQ9CU62 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Gm27477-201ENSMUST00000184649 143 ntBASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Gm28155-201ENSMUST00000191066 151 ntBASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Gm37001-201ENSMUST00000193377 190 ntBASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Gm38329-201ENSMUST00000193473 427 ntBASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Gm19030-201ENSMUST00000194947 552 ntBASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Gm37290-201ENSMUST00000195775 339 ntBASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Gm18340-201ENSMUST00000196342 609 ntBASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Gm34091-201ENSMUST00000200875 604 ntBASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Gm44137-201ENSMUST00000203670 367 ntBASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Gm45409-201ENSMUST00000211486 252 ntBASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC4.06□□□□□ -1.76
Smc1aQ9CU62 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC4.06□□□□□ -1.76
Smc1aQ9CU62 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Smc1aQ9CU62 AC130673.2-201ENSMUST00000228091 797 ntBASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Gm43486-201ENSMUST00000196431 4339 ntBASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Smc1aQ9CU62 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Smc1aQ9CU62 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Smc1aQ9CU62 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Smc1aQ9CU62 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Smc1aQ9CU62 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.05□□□□□ -1.76
Smc1aQ9CU62 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Smc1aQ9CU62 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC4.05□□□□□ -1.76
Smc1aQ9CU62 Gm11600-201ENSMUST00000119592 240 ntBASIC4.05□□□□□ -1.76
Smc1aQ9CU62 Gm15061-201ENSMUST00000121076 1046 ntBASIC4.05□□□□□ -1.76
Smc1aQ9CU62 Gm16458-201ENSMUST00000121428 502 ntBASIC4.05□□□□□ -1.76
Smc1aQ9CU62 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC4.05□□□□□ -1.76
Smc1aQ9CU62 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Smc1aQ9CU62 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Smc1aQ9CU62 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Smc1aQ9CU62 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Smc1aQ9CU62 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Smc1aQ9CU62 Gm29365-201ENSMUST00000189461 699 ntBASIC4.05□□□□□ -1.76
Smc1aQ9CU62 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Smc1aQ9CU62 Gm19620-201ENSMUST00000195972 434 ntBASIC4.05□□□□□ -1.76
Smc1aQ9CU62 Gm18660-201ENSMUST00000199542 629 ntBASIC4.05□□□□□ -1.76
Smc1aQ9CU62 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Smc1aQ9CU62 Gm44088-201ENSMUST00000204595 237 ntBASIC4.05□□□□□ -1.76
Smc1aQ9CU62 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC4.05□□□□□ -1.76
Smc1aQ9CU62 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC4.05□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms