Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.69□□□□□ -1.98
RTRAFQ9CQE8 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RTRAFQ9CQE8 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RTRAFQ9CQE8 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RTRAFQ9CQE8 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.69□□□□□ -1.98
RTRAFQ9CQE8 Gm23136-201ENSMUST00000083425 99 ntBASIC2.69□□□□□ -1.98
RTRAFQ9CQE8 Gm10356-201ENSMUST00000097152 1258 ntBASIC2.69□□□□□ -1.98
RTRAFQ9CQE8 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RTRAFQ9CQE8 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RTRAFQ9CQE8 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.69□□□□□ -1.98
RTRAFQ9CQE8 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RTRAFQ9CQE8 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Gm23271-201ENSMUST00000104052 124 ntBASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Gm11372-201ENSMUST00000117348 570 ntBASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Gm14537-201ENSMUST00000117464 599 ntBASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Gm14142-201ENSMUST00000117833 296 ntBASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Gm11393-201ENSMUST00000118019 288 ntBASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Gm14753-201ENSMUST00000118503 246 ntBASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Gm7219-201ENSMUST00000119619 297 ntBASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Gm22521-201ENSMUST00000158272 134 ntBASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Gm9587-201ENSMUST00000172449 454 ntBASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Gm20773-201ENSMUST00000178940 681 ntBASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Gm28002-201ENSMUST00000184832 100 ntBASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Gm18660-201ENSMUST00000199542 629 ntBASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Gm45380-201ENSMUST00000210465 315 ntBASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 AC117240.2-201ENSMUST00000220921 263 ntBASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Gm18363-201ENSMUST00000221671 730 ntBASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 AC147545.1-201ENSMUST00000227528 108 ntBASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Gm5548-201ENSMUST00000055878 397 ntBASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Gm23447-201ENSMUST00000082798 163 ntBASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Gm23738-201ENSMUST00000082828 171 ntBASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Gm42675-201ENSMUST00000197552 4035 ntBASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.68□□□□□ -1.98
RTRAFQ9CQE8 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Gm29730-201ENSMUST00000192986 1396 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Gm8260-201ENSMUST00000119230 353 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Gm12495-201ENSMUST00000119750 447 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Gm13692-201ENSMUST00000120774 371 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Gm25271-201ENSMUST00000157273 290 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Gm25655-201ENSMUST00000158465 290 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Gm16353-201ENSMUST00000159458 1223 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Gm7909-201ENSMUST00000182688 614 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Mir7235-201ENSMUST00000183796 56 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Gm28390-201ENSMUST00000185212 700 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Gm37098-201ENSMUST00000192290 244 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Gm7897-201ENSMUST00000193981 554 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Gm32447-201ENSMUST00000194265 697 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Gm9023-201ENSMUST00000198408 1038 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Gm42516-201ENSMUST00000198691 767 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Gm43604-201ENSMUST00000199799 705 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Gm44425-201ENSMUST00000203739 429 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Gm10988-201ENSMUST00000209150 1088 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Gm18039-201ENSMUST00000217816 728 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 AC126043.1-201ENSMUST00000221304 1141 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Gm7676-201ENSMUST00000084055 319 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Gm42483-201ENSMUST00000197556 1742 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 Gm8675-201ENSMUST00000201408 1856 ntBASIC2.67□□□□□ -1.98
RTRAFQ9CQE8 AC159188.2-201ENSMUST00000224103 1301 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms